MirGeneDB 3.0

MirGeneDB ID

Dan-Novel-19

Family name DAN-NOVEL-19 (all species)
Seed UCCCUAA
Species Fruit fly (Drosophila ananassae)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) D. ananassae
Node of Origin (family) D. ananassae
Genome context
(Dana_caf1)
scaffold_12903: 535322-535384 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUUAGUUAUCUUCCUUUUCAUGUUUAUCAUCCCUAAUGAGAGCUAUUUUCAUUAAUUUUUCGAAAAUGAUAAUAUCUCUGUGUUAGGGUGACAAAUUUGAGAACAGUCUACAAAAUAAAGU
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Structure
        10          20        30        40         50        60 
UUUUUAGUUAUCUUCCU--|    U    A   U        -    C    U   UUAAUUU 
                   UUUCA GUUU UCA CCCUAAUG AGAG UAUU UCA       \
                   AGAGU UAAA AGU GGGAUUGU UCUC AUAA AGU       U
UGAAAUAAAACAUCUGACA^    U    C   -        G    U    U   AAAAGCU 
 120       110       100         90        80        70
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Fe
Mature sequence

Dan-Novel-19_5p

mirBase accessionNone
Sequence
0- AUCCCUAAUGAGAGCUAUUUUCA -23
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Co-mature sequence

Dan-Novel-19_3p

mirBase accessionNone
Sequence
40- AUAAUAUCUCUGUGUUAGGGUGA -63
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