MirGeneDB 3.0

MirGeneDB ID

Dan-Novel-3

Family name DAN-NOVEL-3 (all species)
Seed AUUUACA
Species Fruit fly (Drosophila ananassae)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) D. ananassae
Node of Origin (family) D. ananassae
Genome context
(Dana_caf1)
scaffold_13335: 210927-210985 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAUAUUGUAAAUAUAUAAUAAUUCUGUUUUCUGCUCGCUAGAUGUAAGUUGGAAGUUUUGAAGUCCUAUUUACAUUAGUAGGCAGAGAAUAAGAUUAUUACAUUCUACGAAAUAUAUG
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Structure
        10          20        30        40        50         
AAAUAUUGUAAAUAUAU--|     UC           CG  A         U  AAGUU 
                   AAUAAU  UGUUUUCUGCU  CU GAUGUAAGU GG     U
                   UUAUUA  AUAAGAGACGG  GA UUACAUUUA CC     U
GUAUAUAAAGCAUCUUACA^     GA           AU  -         U  UGAAG 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Fe
Star sequence

Dan-Novel-3_5p*

mirBase accessionNone
Sequence
0- UCUGCUCGCUAGAUGUAAGUUGG -23
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Mature sequence

Dan-Novel-3_3p

mirBase accessionNone
Sequence
37- UAUUUACAUUAGUAGGCAGAGA -59
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