MirGeneDB 3.0

MirGeneDB ID

Dan-Novel-8

Family name DAN-NOVEL-8 (all species)
Seed AAGGCAU
Species Fruit fly (Drosophila ananassae)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) D. ananassae
Node of Origin (family) D. ananassae
Genome context
(Dana_caf1)
scaffold_12903: 555085-555146 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GAGGAGAGUCGAUCUUAAAGAUUUUCGUAGCUCGUCUAUGUGGUGCCUGUAAGUCCUGUUUUAAAAGUCUUAAGGCAUUUCUUAGAUGAUCUUUGAUGGUCUUAAUAGCUUCAUGAUAAUAA
Get precursor sequence
Structure
        10          20        30        40        50        60 
GAGGAGAGUCGAUCUUA--|    UU   U  C       UGU       G    UCCUGUU 
                   AAGAU  UCG AG UCGUCUA   GGUGCCU UAAG       \
                   UUCUG  AGU UC AGUAGAU   UUACGGA AUUC       U
AAUAAUAGUACUUCGAUAA^    GU   U  U       UCU       -    UGAAAAU 
120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Fe
Star sequence

Dan-Novel-8_5p*

mirBase accessionNone
Sequence
0- CUCGUCUAUGUGGUGCCUGUAAG -23
Get sequence
Mature sequence

Dan-Novel-8_3p

mirBase accessionNone
Sequence
40- UAAGGCAUUUCUUAGAUGAUCU -62
Get sequence