MirGeneDB 3.0

MirGeneDB ID

Dgr-Mir-34-P22

Family name MIR-34 (all species)
Seed GGCAGUG
Species Dimorphilus gyrociliatus (Dimorphilus gyrociliatus)
MiRBase ID
Paralogues Dgr-Mir-34-P21 
Orthologues Aae-Mir-34  Aga-Mir-34  Agr-Mir-34  Asu-Mir-34  Bge-Mir-34  Cbr-Mir-34  Cel-Mir-34  Cin-Mir-34  Cte-Mir-34  Dan-Mir-34  Dlo-Mir-34  Dma-Mir-34  Dme-Mir-34  Dmo-Mir-34  Dpu-Mir-34  Dsi-Mir-34  Dya-Mir-34  Efe-Mir-34  Esc-Mir-34  Gpa-Mir-34  Gsp-Mir-34  Hmi-Mir-34  Hru-Mir-34  Isc-Mir-34  Lgi-Mir-34  Lhy-Mir-34  Llo-Mir-34  Mgi-Mir-34  Mom-Mir-34  Npo-Mir-34  Obi-Mir-34  Ofu-Mir-34  Ovu-Mir-34  Pau-Mir-34  Pca-Mir-34  Pdu-Mir-34  Pfl-Mir-34  Pmi-Mir-34  Pve-Mir-34  Rph-Mir-34  Sko-Mir-34  Snu-Mir-34  Spu-Mir-34  Tca-Mir-34  Tur-Mir-34  War-Mir-34 
Node of Origin (locus) D. gyrociliatus
Node of Origin (family) Bilateria
Genome context
(GCA_904063045.1_Dgyrociliatus)
CAJFCJ010000008.1: 873884-873945 [-]
Precursor
(pre-Mir +30nt flank)
AACUUAGUCAGGAGCGCUGGCCAGCUGCCAUGGCAGUGUGUUUAGCUGGUUGUAAAAAUUGUUUGUCAACAACCAGUGACGCCACUGGCCUGGAACCCGAGCCUUCUCGCGACCUAGCAAAA
Get precursor sequence
Structure
        10         20         30          40        50        60 
AACUUAGUCAGGAGCGCU-   CAGCUG-   U  -    -|    UA         AAAAAUU 
                   GGC       CCA GG CAGU GUGUU  GCUGGUUGU       \
                   CCG       GGU CC GUCA CGCAG  UGACCAACA       G
AAAACGAUCCAGCGCUCUU   AGCCCAA   -  G    C^    --         ACUGUUU 
120       110       100         90        80          70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Mature sequence

Dgr-Mir-34-P22_5p (predicted)

mirBase accessionNone
Sequence
0- UGGCAGUGUGUUUAGCUGGUUGU -23
Get sequence
Star sequence

Dgr-Mir-34-P22_3p* (predicted)

mirBase accessionNone
Sequence
40- AACCAGUGACGCCACUGGCCUG -62
Get sequence