MirGeneDB ID | Dmo-Mir-956-v1 |
Family name |
MIR-956 (all species) |
Seed |
UUCGAGA |
Species |
Fruit fly (Drosophila mojavensis) |
MiRBase ID |
|
Paralogues |
Dmo-Mir-956-v2
|
Orthologues |
Dan-Mir-956-v1
Dme-Mir-956-v1
Dsi-Mir-956-v1
Dya-Mir-956-v1
Gpa-Mir-956-v1
|
Node of Origin (locus) |
Glossinidae + Drosophilidae
|
Node of Origin (family) |
Glossinidae + Drosophilidae
|
Genome context (Dmoj_caf1) |
scaffold_6680: 18620895-18620985 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUAUAUGUGCGAAAUUCAACGAUCGUUAUCGUGUUUGGAAUGGUCUCGUUAGCUAACGGAUGAACAUUAACCAAAGCGCACCUUACGGCGUAGUGUAGUUUCGAGACCACUCUAAUCCAUUGCACCGUUUCUUUCCAUAUGCAAAUUUCCA
Get precursor sequence
|
Structure | 10 20 30 40 50 60 70
UUAUAUGUGCGAAAUUCAACGAUCGUUAUC ------| A UU AACGGAUGAACAUUAACCAA
GUGU UUGGA UGGUCUCG AGCU A
CACG AAUCU ACCAGAGC UUGA G
ACCUUUAAACGUAUACCUUUCUUUGC---- UUACCU^ C U- UGUGAUGCGGCAUUCCACGC
. 140 130 120 110 100 90 80 |
Deep sequencing |
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|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Dmo-Mir-956-v1_5p* |
mirBase accession | None |
Sequence |
0- GUGUUUGGAAUGGUCUCGUUAGCU -24
Get sequence
|
Mature sequence |
Dmo-Mir-956-v1_3p |
mirBase accession | None |
Sequence |
68- UUUCGAGACCACUCUAAUCCAUU -91
Get sequence
|