MirGeneDB ID | Dre-Mir-7132-P1 |
Family name |
MIR-7132 (all species) |
Seed |
ACUUGGU |
Species |
Zebrafish (Danio rerio) |
MiRBase ID |
dre-mir-7132
|
Paralogues |
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Orthologues |
Gmo-Mir-7132-P1
Mal-Mir-7132-P1
Tni-Mir-7132-P1
|
Node of Origin (locus) |
Clupeocephala
|
Node of Origin (family) |
Clupeocephala
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Genome context (danRer11) |
chr3: 59063772-59063829 [+]
UCSC
Ensembl
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Precursor (pre-Mir +30nt flank) |
ACCCAGAAAAAUUAAUAGUUUGGGUCCCUUGACUUGGUCUAAGCUCCUCAGUGUGAUGAUUAAACCUGAGGAGUUUAGAGCAAGUAAAGGGUCUUCAACCGACUCGCCCUUUAAAACC
Get precursor sequence
|
Structure | 10 20 30 40 50
ACCCAGAAAAAUUAAUA--| UG U G G UGUGAU
GUU GG CCCUU ACUUG UCUAAGCUCCUCAG G
CAA UC GGGAA UGAAC AGAUUUGAGGAGUC A
CCAAAAUUUCCCGCUCAGC^ CU U A G CAAAUU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17), UGUG in loop |
Tissue expression
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Br |
Br |
Em |
Ey |
Gu |
Gu |
He |
Li |
Li |
Ov |
Te |
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Mature sequence |
Dre-Mir-7132-P1_5p |
mirBase accession | MIMAT0048669 |
Sequence |
0- GACUUGGUCUAAGCUCCUCAGU -22
Get sequence
|
Star sequence |
Dre-Mir-7132-P1_3p* |
mirBase accession | MIMAT0048670 |
Sequence |
36- UGAGGAGUUUAGAGCAAGUAAA -58
Get sequence
|