MirGeneDB 3.0

MirGeneDB ID

Dre-Mir-7132-P1

Family name MIR-7132 (all species)
Seed ACUUGGU
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-7132
Paralogues
Orthologues Gmo-Mir-7132-P1  Mal-Mir-7132-P1  Tni-Mir-7132-P1 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Clupeocephala
Genome context
(danRer11)
chr3: 59063772-59063829 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACCCAGAAAAAUUAAUAGUUUGGGUCCCUUGACUUGGUCUAAGCUCCUCAGUGUGAUGAUUAAACCUGAGGAGUUUAGAGCAAGUAAAGGGUCUUCAACCGACUCGCCCUUUAAAACC
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Structure
        10          20        30        40        50        
ACCCAGAAAAAUUAAUA--|  UG  U     G     G              UGUGAU 
                   GUU  GG CCCUU ACUUG UCUAAGCUCCUCAG      G
                   CAA  UC GGGAA UGAAC AGAUUUGAGGAGUC      A
CCAAAAUUUCCCGCUCAGC^  CU  U     A     G              CAAAUU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-7132-P1_5p

mirBase accessionMIMAT0048669
Sequence
0- GACUUGGUCUAAGCUCCUCAGU -22
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Star sequence

Dre-Mir-7132-P1_3p*

mirBase accessionMIMAT0048670
Sequence
36- UGAGGAGUUUAGAGCAAGUAAA -58
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