MirGeneDB 3.0

MirGeneDB ID

Gmo-Mir-7132-P1

Family name MIR-7132 (all species)
Seed ACUUGGU
Species Cod (Gadus morhua)
MiRBase ID gmo-mir-7132b
Paralogues Gmo-Mir-7132-P2 
Orthologues Dre-Mir-7132-P1  Mal-Mir-7132-P1  Tni-Mir-7132-P1 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Clupeocephala
Genome context
(Gadus_morhua.gadMor1.dna.toplevel)
GeneScaffold_1698: 26933-26990 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGUUUAGGCCCCAUAGUGUCUCUGCCCCUGGACUUGGUCGAAGCUCCUCAGGCUUACUUGAACCUCUGAGAUGUUUGGAACAAGUACAGGGUCUGGGGCAAUGUCGUGGUGGACUGGU
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Structure
        10          20        30        40        50        
AGUUUAGGCCCCAUAGU--|    UGC     G     G  G    UC      CUUAC 
                   GUCUC   CCCUG ACUUG UC AAGC  CUCAGG     U
                   CGGGG   GGGAC UGAAC AG UUUG  GAGUCU     U
UGGUCAGGUGGUGCUGUAA^    UCU     A     A  G    UA      CCAAG 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Br Gi He In Li Sk Sp Wh
Mature sequence

Gmo-Mir-7132-P1_5p

mirBase accessionMIMAT0044139
Sequence
0- GACUUGGUCGAAGCUCCUCAGG -22
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Co-mature sequence

Gmo-Mir-7132-P1_3p

mirBase accessionMIMAT0044140
Sequence
36- UGAGAUGUUUGGAACAAGUACA -58
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