MirGeneDB 3.0

MirGeneDB ID

Gmo-Mir-7132-P2

Family name MIR-7132 (all species)
Seed ACUUGGU
Species Cod (Gadus morhua)
MiRBase ID gmo-mir-7132a
Paralogues Gmo-Mir-7132-P1 
Orthologues Mal-Mir-7132-P2 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Clupeocephala
Genome context
(Gadus_morhua.gadMor1.dna.toplevel)
GeneScaffold_3795: 75041-75097 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGUCGCCAAGUCUGGCUGUCUCUUCCCCUGGACUUGGUCAAAGCUCCUCAGUACAGCAACAACUCUGAGGCGUUUGGAACAAGUUCAGGGUUCGGGACCCAAUCUGCCAGGGUUUGG
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Structure
        10          20        30        40        50        
UGUCGCCAAGUCUGGCU--|    UUC           G  A    U      UACAGC 
                   GUCUC   CCCUGGACUUG UC AAGC CCUCAG      \
                   CAGGG   GGGACUUGAAC AG UUUG GGAGUC      A
GGUUUGGGACCGUCUAACC^    CUU           A  G    C      UCAACA 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Br Gi He In Li Sk Sp Wh
Mature sequence

Gmo-Mir-7132-P2_5p

mirBase accessionMIMAT0044250
Sequence
0- GACUUGGUCAAAGCUCCUCAGU -22
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Co-mature sequence

Gmo-Mir-7132-P2_3p

mirBase accessionMIMAT0044251
Sequence
35- UGAGGCGUUUGGAACAAGUUCA -57
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