| MirGeneDB ID | Mal-Mir-7132-P2 |
|---|
| Family name |
MIR-7132 (all species) |
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| Seed |
GAGGCGU |
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| Species |
Asian swamp eel (Monopterus albus) |
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| MiRBase ID |
|
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| Paralogues |
Mal-Mir-7132-P1
|
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| Orthologues |
Gmo-Mir-7132-P2
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| Node of Origin (locus) |
Clupeocephala
|
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| Node of Origin (family) |
Clupeocephala
|
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Genome context
(GCA_001952655.1_M_albus_1.0_genomic) |
KV884796.1: 884309-884367 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GACUCGGCUUCUUAGAUGUCUGUGCUCCUGGACUUGGUCAAAGCUCCUCAGCAGAUUAAAGUGACUCUGAGGCGUUUAGAACAAGUUCAGGGUCCUGGACAGAACACAGCAAGAUUAGU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GACUCGGCUUCUUAGAU-- GU-| U G A U CAGAUUA
GUCU GC CCUGGACUUG UC AAGC CCUCAG \
CAGG UG GGACUUGAAC AG UUUG GGAGUC A
UGAUUAGAACGACACAAGA UCC^ - A A C UCAGUGA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Mal-Mir-7132-P2_5p* |
| mirBase accession | None |
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| Sequence |
0- GACUUGGUCAAAGCUCCUCAGC -22
Get sequence
|
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| Mature sequence |
Mal-Mir-7132-P2_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UGAGGCGUUUAGAACAAGUUCA -59
Get sequence
|
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