MirGeneDB ID | Dre-Mir-7148 |
Family name |
MIR-7148 (all species) |
Seed |
AUGGAAA |
Species |
Zebrafish (Danio rerio) |
MiRBase ID |
dre-mir-7148
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Paralogues |
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Orthologues |
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Node of Origin (locus) |
D. rerio
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Node of Origin (family) |
D. rerio
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Genome context (danRer11) |
chr2: 57103411-57103473 [-]
UCSC
Ensembl
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Precursor (pre-Mir +30nt flank) |
UUAAGGUUUCAAAUACUCGCUAAUACUAGUAAUGGAAAUACUCGCUGAUACUGCAAGAAUUGUGGCAUCGGUAUAAGCCAGUAUUUCCGAUACUAGUAUUGGUAUACUAGGAUGGUAUACAAC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UUAAGGUUUCAAAUACUC--| A C G GCAAGAAU
GCUAAUACUAGUA UGGAAAUACU GCU AUACU \
UGGUUAUGAUCAU GCCUUUAUGA CGA UAUGG U
CAACAUAUGGUAGGAUCAUA^ A C A CUACGGUG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
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3' NTU |
No
|
Motifs | No |
Tissue expression
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Br |
Br |
Em |
Ey |
Gu |
Gu |
He |
Li |
Li |
Ov |
Te |
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Mature sequence |
Dre-Mir-7148_5p |
mirBase accession | MIMAT0028206 |
Sequence |
0- AAUGGAAAUACUCGCUGAUACU -22
Get sequence
|
Star sequence |
Dre-Mir-7148_3p* |
mirBase accession | MIMAT0028207 |
Sequence |
41- UAUAAGCCAGUAUUUCCGAUAC -63
Get sequence
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