MirGeneDB 3.0

MirGeneDB ID

Dre-Mir-7148

Family name MIR-7148 (all species)
Seed AUGGAAA
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-7148
Paralogues
Orthologues
Node of Origin (locus) D. rerio
Node of Origin (family) D. rerio
Genome context
(danRer11)
chr2: 57103411-57103473 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUAAGGUUUCAAAUACUCGCUAAUACUAGUAAUGGAAAUACUCGCUGAUACUGCAAGAAUUGUGGCAUCGGUAUAAGCCAGUAUUUCCGAUACUAGUAUUGGUAUACUAGGAUGGUAUACAAC
Get precursor sequence
Structure
        10          20        30        40        50        60 
UUAAGGUUUCAAAUACUC--|            A          C   G     GCAAGAAU 
                    GCUAAUACUAGUA UGGAAAUACU GCU AUACU        \
                    UGGUUAUGAUCAU GCCUUUAUGA CGA UAUGG        U
CAACAUAUGGUAGGAUCAUA^            A          C   A     CUACGGUG 
 120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-7148_5p

mirBase accessionMIMAT0028206
Sequence
0- AAUGGAAAUACUCGCUGAUACU -22
Get sequence
Star sequence

Dre-Mir-7148_3p*

mirBase accessionMIMAT0028207
Sequence
41- UAUAAGCCAGUAUUUCCGAUAC -63
Get sequence