| MirGeneDB ID | Dre-Novel-7 |
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| Family name |
DRE-NOVEL-7 (all species) |
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| Seed |
GGGCGAU |
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| Species |
Zebrafish (Danio rerio) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
D. rerio
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| Node of Origin (family) |
D. rerio
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Genome context
(danRer11) |
chr22: 364003-364066 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
ACUGAAACCCGUUCAGUGAUUCUCCACUAGAGGGCGAUCUGAGUGAACAUGCGUGAGUGAUGUGCAUUGUAUGGUAUCGCACAGAUCACCCCCUAGUGGAGAAAUUACUUUUGGAAACCGUUCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
ACUGAAACCCGUUCAGUGA-- A C A A--| GUGAGUG
UUCUCCACUAG GGG GAUCUG GUGA CAUGC A
AAGAGGUGAUC CCC CUAGAC CGCU GUAUG U
UCUUGCCAAAGGUUUUCAUUA C A A AUG^ UUACGUG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), UGUG in loop |
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Tissue expression
|
| Br |
Br |
Em |
Ey |
Gu |
Gu |
He |
Li |
Li |
Ov |
Te |
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| Mature sequence |
Dre-Novel-7_5p |
| mirBase accession | None |
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| Sequence |
0- AGGGCGAUCUGAGUGAACAUGC -22
Get sequence
|
|---|
| Co-mature sequence |
Dre-Novel-7_3p |
| mirBase accession | None |
|---|
| Sequence |
40- AUGGUAUCGCACAGAUCACCCCCU -64
Get sequence
|
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