MirGeneDB 3.0
MirGeneDB ID

Dsi-Mir-4969

Family name MIR-4969 (all species)
Seed GGUAAAU
Species Fruit fly (Drosophila simulans)
MiRBase ID
Paralogues
Orthologues Dme-Mir-4969  Dya-Mir-4969 
Node of Origin (locus) D. melanogaster subgroup
Node of Origin (family) D. melanogaster subgroup
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)		 3R: 17136036-17136152 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUAUGUUUUUGUAUGGAUUUUUCGGCGUGGCGGUAAAUUGAAUGAUGAGUGGGAGGAUGUCGCAGCCAUUGUUUGGUUGAUAAGGGAGCCUGGCGCACUAUUACCUGGCUCUCUGAAACGAGAGCCCACCUGUAAAUCAAUACCACCCCGCCGAAGCGACAUCAUCAUAAUAAUCAU
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Structure
        10          20        30        40        50        60        70        80         
AUAUGUUUUUGUAUGGAUU--|       U  C    AA    AUG  GA     AGGAUGUCGCAGCCAUUGUUUGGUUGAUAAGGGAG 
                     UUUCGGCG GG GGUA  UUGA   AU  GUGGG                                   \
                     GAAGCCGC CC CCAU  AACU   UG  CACCC                                   C
UACUAAUAAUACUACUACAGC^       C  A    --    AAA  UC     GAGAGCAAAGUCUCUCGGUCCAUUAUCACGCGGUC 
     170       160       150         140       130       120       110       100        90
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
He Wh
Mature sequence

Dsi-Mir-4969_5p
mirBase accessionNone
Sequence 
0- CGGUAAAUUGAAUGAUGAGUGGGA -24
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Star sequence

Dsi-Mir-4969_3p*
mirBase accessionNone
Sequence 
95- CCACCUGUAAAUCAAUACCACC -117
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