MirGeneDB 3.0

MirGeneDB ID

Dya-Mir-964-v1

Family name MIR-964 (all species)
Seed UAGAAUA
Species Fruit fly (Drosophila yakuba)
MiRBase ID
Paralogues Dya-Mir-964-v2 
Orthologues Dan-Mir-964  Dme-Mir-964-v1  Dmo-Mir-964  Dsi-Mir-964-v1 
Node of Origin (locus) Drosophila
Node of Origin (family) Drosophila
Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)
2L: 13551083-13551143 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCAAUCAAUGAAAUCUUGGUCCCACUUGUCUUAGAAUAGGGGAGCUUAACUUAUGUAUAUCAUGUAUAAGUUAAGAACCUUUAUUCUAAGACAAUUCGACUACAAAAUCAACUGAAAAACU
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Structure
        10           20        30        40        50          
UCAAUCAAUGAAAUCUU---|   CCAC                 AG        AUGUAUA 
                    GGUC    UUGUCUUAGAAUAGGGG  CUUAACUU       \
                    UCAG    AACAGAAUCUUAUUUCC  GAAUUGAA       U
UCAAAAAGUCAACUAAAACA^   CUU-                 AA        UAUGUAC 
 .       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
He Wh
Mature sequence

Dya-Mir-964-v1_5p

mirBase accessionNone
Sequence
0- UUAGAAUAGGGGAGCUUAACUU -22
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Star sequence

Dya-Mir-964-v1_3p*

mirBase accessionNone
Sequence
39- GUUAAGAACCUUUAUUCUAAGA -61
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