MirGeneDB ID | Dya-Mir-986 |
Family name |
MIR-986 (all species) |
Seed |
CUCGAAU |
Species |
Fruit fly (Drosophila yakuba) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Dan-Mir-986
Dme-Mir-986
Dsi-Mir-986
|
Node of Origin (locus) |
D. melanogaster group
|
Node of Origin (family) |
D. melanogaster group
|
Genome context (Drosophila_yakuba.dyak_caf1.dna.toplevel) |
2L: 16988581-16988648 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AAACGCAGAGGACACACCUAAAAUUACCCAUCUCGAAUAGCGUUGUGACUGAGGUAACUGCGCAUCGUAUCUACUCAGCGGCGAAGCUAUUCCAGUAAGGUUAUUUUGGGCCAGCGACUUUACGACCG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
AAACGCAGAGGACACAC--| U CAU C G GA GGUAACUGCG
CUAAAAU ACC CU GAAUAGC UUGU CUGA C
GGUUUUA UGG GA CUUAUCG AGCG GACU A
GCCAGCAUUUCAGCGACCG^ U AAU C A GC CAUCUAUGCU
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
Comment | There is a single snp between the mirbase entry and this entry. |
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Dya-Mir-986_5p |
mirBase accession | None |
Sequence |
0- UCUCGAAUAGCGUUGUGACUGA -22
Get sequence
|
Star sequence |
Dya-Mir-986_3p* |
mirBase accession | None |
Sequence |
46- AGCGGCGAAGCUAUUCCAGUAA -68
Get sequence
|