MirGeneDB 3.0

27 microRNA genes with node of origin D. melanogaster group
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Dan-Mir-959-v1 None MIR-959 UGUCAUC None None scaffold_12916 11084735 11084797 + D. melanogaster group D. melanogaster group No 1
Dme-Mir-959-v1 dme-mir-959 MIR-959 UGUCAUC MIMAT0020854 MIMAT0005473 2L 5640958 5641021 + D. melanogaster group D. melanogaster group No 1
Dsi-Mir-959-v1 dsi-mir-959 MIR-959 UGUCAUC None MIMAT0012508 2L 5445611 5445674 + D. melanogaster group D. melanogaster group No 1
Dya-Mir-959-v1 None MIR-959 UGUCAUC None None 2L 13552286 13552348 - D. melanogaster group D. melanogaster group No 1
Dan-Mir-959-v2 None MIR-959 UAGUACU None None scaffold_12916 11084736 11084796 + D. melanogaster group D. melanogaster group No 1
Dme-Mir-959-v2 dme-mir-959 MIR-959 UAGUACU MIMAT0020854 MIMAT0005473 2L 5640959 5641020 + D. melanogaster group D. melanogaster group No 1
Dsi-Mir-959-v2 dsi-mir-959 MIR-959 UAGUACU None MIMAT0012508 2L 5445612 5445673 + D. melanogaster group D. melanogaster group No 1
Dya-Mir-959-v2 None MIR-959 UAGUACU None None 2L 13552287 13552347 - D. melanogaster group D. melanogaster group No 1
Dan-Mir-961 None MIR-961 UUGAUCA None None scaffold_12916 11085018 11085076 + D. melanogaster group D. melanogaster group Unknown 1 1
Dme-Mir-961 dme-mir-961 MIR-961 UUGAUCA MIMAT0005475 MIMAT0020856 2L 5641208 5641266 + D. melanogaster group D. melanogaster group No 1
Dsi-Mir-961 dsi-mir-961 MIR-961 UUGAUCA MIMAT0012469 MIMAT0012470 2L 5445861 5445919 + D. melanogaster group D. melanogaster group No 1 1
Dya-Mir-961 None MIR-961 UUGAUCA None None 2L 13552048 13552106 - D. melanogaster group D. melanogaster group Unknown 1 1
Dya-Mir-978 dya-mir-978 MIR-978 UGUCCAG MIMAT0039179 MIMAT0039180 X 11883774 11883834 - D. melanogaster group D. melanogaster group No 1
Dan-Mir-978-v1 None MIR-978 GUCCAGU None None scaffold_13417 2460540 2460602 - D. melanogaster group D. melanogaster group No 1 1
Dme-Mir-978-v1 dme-mir-978 MIR-978 GUCCAGU MIMAT0020875 MIMAT0005494 X 19561251 19561313 + D. melanogaster group D. melanogaster group No 1
Dsi-Mir-978-v1 dsi-mir-978a MIR-978 GUCCAGU MIMAT0037355 MIMAT0012424 X 18333231 18333293 + D. melanogaster group D. melanogaster group No 1
Dan-Mir-978-v2 None MIR-978 UGUCCAG None None scaffold_13417 2460541 2460600 - D. melanogaster group D. melanogaster group No
Dme-Mir-978-v2 dme-mir-978 MIR-978 UGUCCAG MIMAT0020875 MIMAT0005494 X 19561252 19561312 + D. melanogaster group D. melanogaster group No 1 1
Dsi-Mir-978-v2 dsi-mir-978a MIR-978 UGUCCAG MIMAT0037355 MIMAT0012424 X 18333232 18333292 + D. melanogaster group D. melanogaster group No 1 1 1
Dan-Mir-986 None MIR-986 CUCGAAU None None scaffold_13266 1670206 1670268 - D. melanogaster group D. melanogaster group No 1
Dme-Mir-986 dme-mir-986 MIR-986 CUCGAAU MIMAT0005503 MIMAT0020884 2R 8445000 8445067 + D. melanogaster group D. melanogaster group No 1
Dsi-Mir-986 dsi-mir-986 MIR-986 CUCGAAU MIMAT0012431 MIMAT0012432 2R 5147136 5147203 + D. melanogaster group D. melanogaster group No 1
Dya-Mir-986 None MIR-986 CUCGAAU None None 2L 16988581 16988648 + D. melanogaster group D. melanogaster group No 1
Dan-Mir-1007 None MIR-1007 AAGCUCA None None scaffold_13334 1054393 1054454 + D. melanogaster group D. melanogaster group No
Dme-Mir-1007 dme-mir-1007 MIR-1007 AAGCUCA MIMAT0020904 MIMAT0005020 X 21296385 21296449 - D. melanogaster group D. melanogaster group No
Dsi-Mir-1007 None MIR-1007 AAGCUCA None None X 19888142 19888206 - D. melanogaster group D. melanogaster group No
Dya-Mir-1007 None MIR-1007 AAGCUCA None None X 20343136 20343200 - D. melanogaster group D. melanogaster group Yes

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