MirGeneDB 3.0

MirGeneDB ID

Dya-Mir-959-v1

Family name MIR-959 (all species)
Seed UGUCAUC
Species Fruit fly (Drosophila yakuba)
MiRBase ID
Paralogues Dya-Mir-959-v2 
Orthologues Dan-Mir-959-v1  Dme-Mir-959-v1  Dsi-Mir-959-v1 
Node of Origin (locus) D. melanogaster group
Node of Origin (family) D. melanogaster group
Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)
2L: 13552286-13552348 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUUAAAUUGAUUUUAACUUUGUUCUAUAUUCUUAGUACUCGGGUUGACAAAGACCUUUCCUUGCGGCGCCUUUGUCAUCGGGGGUAUUAUGAAAUAUAGCUCAAAGAAACUGCAAGGAUCAUC
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Structure
        10         20         30        40        50        60 
GUUAAAUUGAUUUUAAC-    UU     -|  U        GGGU       GACCUUUCC 
                  UUUG  CUAUA UUC UAGUACUC    UGACAAA         \
                  AAAC  GAUAU AAG AUUAUGGG    ACUGUUU         U
CUACUAGGAACGUCAAAG    UC     A^  U        GGCU       CCGCGGCGU 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
He Wh
Star sequence

Dya-Mir-959-v1_5p*

mirBase accessionNone
Sequence
0- CUUAGUACUCGGGUUGACAAA -21
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Mature sequence

Dya-Mir-959-v1_3p

mirBase accessionNone
Sequence
41- UUGUCAUCGGGGGUAUUAUGAA -63
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