MirGeneDB 3.0
MirGeneDB ID

Dme-Mir-978-v2

Family name MIR-978 (all species)
Seed UGUCCAG
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-978
Paralogues Dme-Mir-978-v1 
Orthologues Dan-Mir-978-v2  Dsi-Mir-978-v2  Dya-Mir-978 
Node of Origin (locus) D. melanogaster group
Node of Origin (family) D. melanogaster group
Genome context
(Drosophila_melanogaster_BDGP6)		 X: 19561252-19561312 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-978-v2)		 Mir-972 X: 19551171-19551226 [+] UCSC Ensembl
Mir-973 X: 19551546-19551611 [+] UCSC Ensembl
Mir-974 X: 19551702-19551763 [+] UCSC Ensembl
Mir-2499 X: 19557029-19557090 [+] UCSC Ensembl
Mir-975 X: 19558768-19558828 [+] UCSC Ensembl
Mir-976 X: 19558917-19558975 [+] UCSC Ensembl
Mir-977 X: 19559046-19559108 [+] UCSC Ensembl
Mir-978-v1 X: 19561251-19561313 [+] UCSC Ensembl
Mir-978-v2 X: 19561252-19561312 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGUACAAUAUCUUGGUUGGCGGCACAAUCUGCAAUCUACGCCACUGGCUUACGUUGCAAUCGAAAAUCGUGUCCAGUGCCGUAAAUUGCAGUUGUGUGAACGCAAACGGCAGCAGCGAAGG
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Structure
        10        20           30        40        50        60
AGUACAAUAUCUUGGUUG   ---|     U       C    C      CU    UUGCAA 
                  GCG   GCACAA CUGCAAU UACG CACUGG  UACG      U
                  CGC   UGUGUU GACGUUA AUGC GUGACC  GUGC      C
GGAAGCGACGACGGCAAA   AAG^     -       A    C      U-    UAAAAG 
 .       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Bo He He La Ov Sa Wh
Star sequence

Dme-Mir-978-v2_5p*
mirBase accessionMIMAT0020875
Sequence 
0- GCAAUCUACGCCACUGGCUUACGU -24
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Mature sequence

Dme-Mir-978-v2_3p
mirBase accessionMIMAT0005494
Sequence 
38- GUGUCCAGUGCCGUAAAUUGCAG -61
Get sequence
Proposed targets microrna.org: MIMAT0005494
TargetScanFly: dme-miR-978