MirGeneDB 3.0

MirGeneDB ID

Dme-Mir-974

Family name MIR-974 (all species)
Seed AGCGAGC
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-974
Paralogues
Orthologues Dan-Mir-974  Dmo-Mir-974  Dsi-Mir-974 
Node of Origin (locus) Drosophila
Node of Origin (family) Drosophila
Genome context
(Drosophila_melanogaster_BDGP6)
X: 19551702-19551763 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-974)
Mir-972 X: 19551171-19551226 [+] UCSC Ensembl
Mir-973 X: 19551546-19551611 [+] UCSC Ensembl
Mir-974 X: 19551702-19551763 [+] UCSC Ensembl
Mir-2499 X: 19557029-19557090 [+] UCSC Ensembl
Mir-975 X: 19558768-19558828 [+] UCSC Ensembl
Mir-976 X: 19558917-19558975 [+] UCSC Ensembl
Mir-977 X: 19559046-19559108 [+] UCSC Ensembl
Mir-978-v1 X: 19561251-19561313 [+] UCSC Ensembl
Mir-978-v2 X: 19561252-19561312 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAAGCUCAAUUGUCACCGGUCAUGUCCUCCAAGCGAGCAAAGAAGUAGUAUUUGUGUUUCCAAGAGCAAAUAUAACUUCAUUGGAAGCUAAGUGGAUUUGCCCAAAUCAGCUUGGUAUUUAU
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Structure
        10          20        30        40        50        60
UAAGCUCAAUUGUCACC--| U  U    UCCA   GAG   A     A     UGUGUUU 
                   GG CA GUCC    AGC   CAA GAAGU GUAUU       C
                   CC GU UAGG    UCG   GUU CUUCA UAUAA       C
UAUUUAUGGUUCGACUAAA^ C  U    UGAA   AAG   A     A     ACGAGAA 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Bo He He La Ov Sa Wh
Mature sequence

Dme-Mir-974_5p

mirBase accessionMIMAT0005490
Sequence
0- AAGCGAGCAAAGAAGUAGUAUU -22
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Proposed targets microrna.org: MIMAT0005490
TargetScanFly: dme-miR-974
Co-mature sequence

Dme-Mir-974_3p

mirBase accessionMIMAT0020871
Sequence
40- UAUAACUUCAUUGGAAGCUAAG -62
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