MirGeneDB 3.0

MirGeneDB ID

Dme-Mir-973

Family name MIR-973 (all species)
Seed GGUUGGU
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-973
Paralogues
Orthologues Dan-Mir-973  Dmo-Mir-973  Dsi-Mir-973 
Node of Origin (locus) Drosophila
Node of Origin (family) Drosophila
Genome context
(Drosophila_melanogaster_BDGP6)
X: 19551546-19551611 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-973)
Mir-972 X: 19551171-19551226 [+] UCSC Ensembl
Mir-973 X: 19551546-19551611 [+] UCSC Ensembl
Mir-974 X: 19551702-19551763 [+] UCSC Ensembl
Mir-2499 X: 19557029-19557090 [+] UCSC Ensembl
Mir-975 X: 19558768-19558828 [+] UCSC Ensembl
Mir-976 X: 19558917-19558975 [+] UCSC Ensembl
Mir-977 X: 19559046-19559108 [+] UCSC Ensembl
Mir-978-v1 X: 19561251-19561313 [+] UCSC Ensembl
Mir-978-v2 X: 19561252-19561312 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUACUUCACUUUACCGUCGUCGACUUUUCGUGGUUGGUGGUUGAACUUCGAUUUUAAGUAUUUAAAUAAAAUGAAAUCUGUUCAUUCUCCGACACAAGAAGUUCACGCAAAGGAGCUGCAGCUGCG
Get precursor sequence
Structure
        10          20        30        40        50        60    
AUACUUCACUUUACCGU--|  C       C   G    U GU     UUC      AAGUAUUU 
                   CGU GACUUUU GUG UUGG G  UGAAC   GAUUUU        \
                   GCA UUGAAGA CAC AGCC C  ACUUG   CUAAAG        A
GCGUCGACGUCGAGGAAAC^  C       A   -    U UU     U--      UAAAAUAA 
    120       110       100         90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Bo He He La Ov Sa Wh
Mature sequence

Dme-Mir-973_5p

mirBase accessionMIMAT0005489
Sequence
0- UGGUUGGUGGUUGAACUUCGAUUUU -25
Get sequence
Proposed targets microrna.org: MIMAT0005489
TargetScanFly: dme-miR-973
Star sequence

Dme-Mir-973_3p*

mirBase accessionMIMAT0020870
Sequence
44- AAUCUGUUCAUUCUCCGACACA -66
Get sequence