MirGeneDB 3.0

MirGeneDB ID

Dan-Mir-973

Family name MIR-973 (all species)
Seed CUGUUCA
Species Fruit fly (Drosophila ananassae)
MiRBase ID
Paralogues
Orthologues Dme-Mir-973  Dmo-Mir-973  Dsi-Mir-973 
Node of Origin (locus) Drosophila
Node of Origin (family) Drosophila
Genome context
(Dana_caf1)
scaffold_13417: 2478669-2478737 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GAACUUAAUAUUGAAAUGACACCGACUCCUCGUGUUUGGCGAUUGAACCUGGAUUUUUAAUUUUCGAGUACGAGAAAUCUGUUCAUUCCUCGACACUAGUAGUUGGCGCGACACUCAGCGCACCAAACA
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Structure
        10        20          30        40        50        60     
GAACUUAAUAUUGAAAUGACA--|     C  C     U  C  U     CU     UUUAAUUUU 
                       CCGACU CU GUGUU GG GA UGAAC  GGAUU         C
                       GGUUGA GA CACAG UC CU ACUUG  UCUAA         G
ACAAACCACGCGACUCACAGCGC^     U  U     C  -  U     --     AGAGCAUGA 
       120       110       100        90           80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Fe
Star sequence

Dan-Mir-973_5p* (predicted)

mirBase accessionNone
Sequence
0- CGUGUUUGGCGAUUGAACCUGGAUU -25
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Mature sequence

Dan-Mir-973_3p

mirBase accessionNone
Sequence
47- UCUGUUCAUUCCUCGACACUAG -69
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