Mir-973

MirGeneDB ID

Dsi-Mir-973

Family name

MIR-973 (all species)

Seed

GGUUGGU

Species

Fruit fly (Drosophila simulans)

MiRBase ID

dsi-mir-973

Paralogues

Orthologues

Dan-Mir-973 Dme-Mir-973 Dmo-Mir-973

Node of Origin (locus)

Drosophila

Node of Origin (family)

Drosophila

Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)

X: 18323323-18323387 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-973)

Mir-972 X: 18322964-18323019 [+] UCSC Ensembl
Mir-9369 X: 18323144-18323204 [+] UCSC Ensembl
Mir-973 X: 18323323-18323387 [+] UCSC Ensembl
Mir-974 X: 18323461-18323522 [+] UCSC Ensembl
Mir-975 X: 18330806-18330866 [+] UCSC Ensembl
Mir-976 X: 18330933-18330991 [+] UCSC Ensembl
Mir-977 X: 18331071-18331133 [+] UCSC Ensembl
Mir-978-v1 X: 18333231-18333293 [+] UCSC Ensembl
Mir-978-v2 X: 18333232-18333292 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

AGAUUAUAUGACUUUAACGUAUACUUUUCCGGGUUGGUGGUUGAACUUCGAUUUUAAGCAUUUAAAUAAGAUAAAUCUGUUCAUUCUUCGACCCAAAAAGUUCACGUGAAGAAGCAGCGAACAUC

Get precursor sequence

Structure

        10          20        30        40        50        60   
AGAUUAUAUGACUUUAA--|  AU      CC       U GU     UUC     UAAGCAUU 
                   CGU  ACUUUU  GGGUUGG G  UGAAC   GAUUU        U
                   GCA  UGAAAA  CCCAGCU C  ACUUG   CUAAA        A
CUACAAGCGACGAAGAAGU^  CU      A-       U UU     U--     UAGAAUAA 
   120       110       100         90        80          70