MirGeneDB 2.1

MirGeneDB ID

Dsi-Mir-9369

Family name MIR-9369 (all species)
Seed UACAUAU
Species Fruit fly (Drosophila simulans)
MiRBase ID dsi-mir-9369
Paralogues
Orthologues
Node of Origin (locus) D. simulans
Node of Origin (family) D. simulans
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)
X: 18323144-18323204 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-9369)
Mir-972 X: 18322964-18323019 [+] UCSC Ensembl
Mir-9369 X: 18323144-18323204 [+] UCSC Ensembl
Mir-973 X: 18323323-18323387 [+] UCSC Ensembl
Mir-974 X: 18323461-18323522 [+] UCSC Ensembl
Mir-975 X: 18330806-18330866 [+] UCSC Ensembl
Mir-976 X: 18330933-18330991 [+] UCSC Ensembl
Mir-977 X: 18331071-18331133 [+] UCSC Ensembl
Mir-978-v1 X: 18333231-18333293 [+] UCSC Ensembl
Mir-978-v2 X: 18333232-18333292 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUAAAUUUCAUUUGUAUCUGUCAUUCGUGGAGCGAGAGGGUAUUAUGUAUUCAUAUUUAUAAAAUCAGGAUACAUAUUCUUCUUUGGCUUUACGAGUAAUGGAUAUCGUCAACAGUGGAAU
Get precursor sequence
Structure
        10          20        30        40        50          
UUAAAUUUCAUUUGUAU--|   C           G      UAU         AUAUUUA 
                   CUGU AUUCGUGGAGC AGAGGG   UAUGUAUUC       \
                   GGUA UGAGCAUUUCG UUUCUU   AUACAUAGG       U
UAAGGUGACAACUGCUAUA^   A           G      CUU         ACUAAAA 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
He Wh
Star sequence

Dsi-Mir-9369_5p*

mirBase accessionMIMAT0039118
Sequence
0- AGCGAGAGGGUAUUAUGUAUUC -22
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Mature sequence

Dsi-Mir-9369_3p

mirBase accessionMIMAT0039119
Sequence
39- AUACAUAUUCUUCUUUGGCUUU -61
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