| MirGeneDB ID | Dmo-Mir-973 |
|---|
| Family name |
MIR-973 (all species) |
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| Seed |
CUGUUCA |
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| Species |
Fruit fly (Drosophila mojavensis) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Dan-Mir-973
Dme-Mir-973
Dsi-Mir-973
|
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| Node of Origin (locus) |
Drosophila
|
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| Node of Origin (family) |
Drosophila
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Genome context
(Dmoj_caf1) |
scaffold_6328: 2909125-2909190 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GUGCGUCAAAAUCACUCGGCUUUCACUUUUCGUGUUCGAUGUUUGAACUUGGAUUUUUAAAAUAUGAAAAGAAAUCUGUUCAUUCCUCGACACUAAGAGUUUAGGUCUAUAAACAACAUGGGUGUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GUGCGUCAAAAUCACUC--| UC C U UGUU UU UUUAAAAU
GGCUU ACUUUU GUGU CGA UGAAC GGAUU \
CUGGA UGAGAA CACA GCU ACUUG UCUAA A
UUGUGGGUACAACAAAUAU^ UU U - CCUU -- AGAAAAGU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Dmo-Mir-973_5p* |
| mirBase accession | None |
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| Sequence |
0- CGUGUUCGAUGUUUGAACUUGGAUU -25
Get sequence
|
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| Mature sequence |
Dmo-Mir-973_3p |
| mirBase accession | None |
|---|
| Sequence |
44- UCUGUUCAUUCCUCGACACUAA -66
Get sequence
|
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