| MirGeneDB ID | Dmo-Mir-974 |
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| Family name |
MIR-974 (all species) |
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| Seed |
AGCGAGC |
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| Species |
Fruit fly (Drosophila mojavensis) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Dan-Mir-974
Dme-Mir-974
Dsi-Mir-974
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| Node of Origin (locus) |
Drosophila
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| Node of Origin (family) |
Drosophila
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Genome context
(Dmoj_caf1) |
AAPU01008234.1: 40-103 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
NNNNUCAAUCAGACGCUGGGCAUUCCCUCUGAGCGAGCAGAGAAGUAUUAUUUGCGUGCAUCUGAUAUCAAAUAAAACUUUUUUGGUUGCUGCGAGGUAUUGUUGAAAUGUAAACGUUGCUCGC
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
NNNNUCAAUCAGACGCUG--| UUC UG G A UUGCGUGCA
GGCA CCUC AGCGA CAGAGAAGU UUAU U
UUGU GGAG UCGUU GUUUUUUCA AAUA C
CGCUCGUUGCAAAUGUAAAG^ UAU CG G A AACUAUAGU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | There is a deletion in the 3p arm in the assembly relative to the read and because of the misassembly this mistake has been fixed in an edited trace. |
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| 3' NTU |
Unknown
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| Motifs | UG at 5p(-14) |
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Tissue expression
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| Mature sequence |
Dmo-Mir-974_5p |
| mirBase accession | None |
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| Sequence |
0- GAGCGAGCAGAGAAGUAUUAU -21
Get sequence
|
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| Star sequence |
Dmo-Mir-974_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
43- AAAACUUUUUUGGUUGCUGCG -64
Get sequence
|
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