MirGeneDB 3.0
MirGeneDB ID

Dan-Mir-978-v1

Family name MIR-978 (all species)
Seed GUCCAGU
Species Fruit fly (Drosophila ananassae)
MiRBase ID
Paralogues Dan-Mir-978-v2 
Orthologues Dme-Mir-978-v1  Dsi-Mir-978-v1  Dya-Mir-978 
Node of Origin (locus) D. melanogaster group
Node of Origin (family) D. melanogaster group
Genome context
(Dana_caf1)		 scaffold_13417: 2460540-2460602 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UGCGGACAGGGCAAGCUCGGCGGCACAGACAGCAUUCGACGCUGCUGGCUUACGUGGUGGUUGAUAUCCGUGUCCAGUGACGUUGAUUGCAGUUGUGUAGACGCGAAUUACAGCGACCGAUAG
Get precursor sequence
Structure
        10        20           30        40        50        60 
UGCGGACAGGGCAAGCUCG   ---|     ACA   U      CU     CU    UGGUGG 
                   GCG   GCACAG   GCA UCGACG  GCUGG  UACG      U
                   CGC   UGUGUU   CGU AGUUGC  UGACC  GUGC      U
GAUAGCCAGCGACAUUAAG   AGA^     GA-   U      AG     U-    CUAUAG 
 120       110       100         90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Fe
Star sequence

Dan-Mir-978-v1_5p*
mirBase accessionNone
Sequence 
0- AGCAUUCGACGCUGCUGGCUUACGUG -26
Get sequence
Mature sequence

Dan-Mir-978-v1_3p
mirBase accessionNone
Sequence 
40- UGUCCAGUGACGUUGAUUGCAGU -63
Get sequence