| MirGeneDB ID | Eba-Mir-92-o118 |
|---|
| Family name |
MIR-92 (all species) |
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| Seed |
AUUGCAC |
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| Species |
Epimenia (Solenogaster) (Epimenia babai) |
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| MiRBase ID |
|
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| Paralogues |
Eba-Mir-92-o119
|
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| Orthologues |
Asu-Mir-92
Cel-Mir-92
Esc-Mir-92
Gsp-Mir-92
Hmi-Mir-92
Isc-Mir-92
Obi-Mir-92
Sme-Mir-92
|
|---|
| Node of Origin (locus) |
E. babai
|
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| Node of Origin (family) |
Bilateria
|
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Genome context
(GCA_011762755.2_ASM1176275v2_Epimenia) |
WURV02021373.1: 1248-1307 [+]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
CUCAAAUCAACAGAGAACUUUGUCGAGCGCGUGUCGUGCCCGGUGCAACUUGUCCCAGUCGUAUCUCAAAUUGCACUGGUCCCGGCGUGCGUUCGUCAGAAGGAACACGACACCGGAAUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUCAAAUCAACAGAGAAC--| U UGC C UCCCAG
UUUG CGAGCGCGUGUCG CCGGUGCAA UUG U
AGAC GCUUGCGUGCGGC GGUCACGUU AAC C
GUAAGGCCACAGCACAAGGA^ U CCU A UCUAUG
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
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| Comment | It is not clear either from phylogenetic or syntenic information how many Mir-92 genes were present in the last common ancestor of bilaterians and how the vertebrate Mir-92s relate to the invertebrate Mir-92s and thus these multiple paralogues in invertebrates are classified here as orphans pending additional data. |
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Eba-Mir-92-o118_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- GUGUCGUGCCCGGUGCAACUUG -22
Get sequence
|
|---|
| Mature sequence |
Eba-Mir-92-o118_3p |
| mirBase accession | None |
|---|
| Sequence |
38- AAUUGCACUGGUCCCGGCGUGC -60
Get sequence
|
|---|
