| MirGeneDB ID | Ebu-Mir-26-P7 |
|---|
| Family name |
MIR-26 (all species) |
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| Seed |
UCAAGUA |
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| Species |
Inshore hagfish (Eptatretus burgeri) |
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| MiRBase ID |
|
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| Paralogues |
Ebu-Mir-26-P5
Ebu-Mir-26-P6
|
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| Orthologues |
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| Node of Origin (locus) |
E. burgeri
|
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| Node of Origin (family) |
Vertebrata
|
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Genome context
(Eburgeri_3) |
FYBX02010339.1: 270818-270877 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
CAAAGGAUUGUUGAAAUGAACGCAGUCCCAUUCAAGUAAUCCAGGAUAGGUUGUGCCAUGCCUUUCAGCCUGUCCUCGAUUACUUGGAUGGGAAGGCGGUUCAUCUGUGCCAACCCAGUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CAAAGGAUUGUUGAAAU- -| AG C GUGCCA
GAA CGC UCCCAUUCAAGUAAUC AGGAUAGGUU U
CUU GCG AGGGUAGGUUCAUUAG UCCUGUCCGA G
CUGACCCAACCGUGUCUA G^ GA C CUUUCC
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14), UGUG in loop |
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Tissue expression
|
|
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| Mature sequence |
Ebu-Mir-26-P7_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UUCAAGUAAUCCAGGAUAGGUU -22
Get sequence
|
|---|
| Star sequence |
Ebu-Mir-26-P7_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- CCUGUCCUCGAUUACUUGGAUG -60
Get sequence
|
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