| MirGeneDB ID | Ebu-Mir-26-P5 |
|---|
| Family name |
MIR-26 (all species) |
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| Seed |
UCAAGUA |
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| Species |
Inshore hagfish (Eptatretus burgeri) |
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| MiRBase ID |
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| Paralogues |
Ebu-Mir-26-P6
Ebu-Mir-26-P7
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| Orthologues |
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| Node of Origin (locus) |
E. burgeri
|
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| Node of Origin (family) |
Vertebrata
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Genome context
(Eburgeri_3) |
FYBX02009576.1: 1795671-1795730 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GACUGUUUUUCACAUCGGGCUUGGUUCUCGUUCAAGUAAUCCAGGAUAGGCUGUAUGCCUUUGCUAAGCCUGUCCUCGGUUGCUUGGACCAGAUGCAGUCCCUUAGCAGCGUGUCGGAUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GACUGUUUUUCACAUCG--| C GU C C GUAUGC
GG UUG UCU GUUCAAGUAAUC AGGAUAGGCU C
CC GAC AGA CAGGUUCGUUGG UCCUGUCCGA U
CUAGGCUGUGCGACGAUUC^ U GU C C AUCGUU
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Ebu-Mir-26-P5_5p |
| mirBase accession | None |
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| Sequence |
0- UUCAAGUAAUCCAGGAUAGGCU -22
Get sequence
|
|---|
| Star sequence |
Ebu-Mir-26-P5_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- CCUGUCCUCGGUUGCUUGGACC -60
Get sequence
|
|---|
