MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-1379

Family name MIR-1379 (all species)
Seed ACGGGCU
Species Horse (Equus caballus)
MiRBase ID eca-mir-1379
Paralogues
Orthologues Cpo-Mir-1379 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009177.1: 12978717-12978773 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GACUGAGGGGCUUUCAGGGAGCCCACGGGCUCAGGCUCUCAGCCCGAGCCGUGUUCUUCAGAUGGGCACGGGCUGCAGCGCCGACGCCUGUGGGCCCCAUGGGCUGGGCCAAACCGG
Get precursor sequence
Structure
        10          20        30          40        50       
GACUGAGGGGCUUUCAG--  A          -| A   U  -       A   GUGUUC 
                   GG GCCCACGGGC UC GGC CU CAGCCCG GCC      U
                   CC CGGGUGUCCG AG CCG GA GUCGGGC CGG      U
GGCCAAACCGGGUCGGGUA  C          C^ -   C  C       A   GUAGAC 
     110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er
Star sequence

Eca-Mir-1379_5p*
mirBase accessionNone
Sequence 
0- UCAGGCUCUCAGCCCGAGCC -20
Get sequence
Mature sequence

Eca-Mir-1379_3p
mirBase accessionMIMAT0034674
Sequence 
36- CACGGGCUGCAGCGCCGACGC -57
Get sequence