MirGeneDB 3.0

MirGeneDB ID

Eca-Mir-2483

Family name MIR-2483 (all species)
Seed CUGUCAA
Species Horse (Equus caballus)
MiRBase ID eca-mir-2483
Paralogues
Orthologues Bta-Mir-2483  Cfa-Mir-2483  Dno-Mir-2483  Ete-Mir-2483  Laf-Mir-2483 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)
CM009179.1: 103584119-103584178 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGAUGACACCCAAAAAUGUGAGUGAAAAGUUCUGUCAACCAUCCAGCUGUUUGGGGUGAUGCAAACAAACAUCUAGUUGGUUGAGAGAAUUUUUUACUUAGUCUCUGGGUGUUUUGGAGU
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Structure
        10          20        30        40        50         
AGAUGACACCCAAAAAUG--|              G       UCC  C      GGGUG 
                    UGAGUGAAAAGUUCU UCAACCA   AG UGUUUG     A
                    AUUCAUUUUUUAAGA AGUUGGU   UC ACAAAC     U
UGAGGUUUUGUGGGUCUCUG^              G       UGA  U      AAACG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Mature sequence

Eca-Mir-2483_5p

mirBase accessionMIMAT0034700
Sequence
0- UCUGUCAACCAUCCAGCUGUUUG -23
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Co-mature sequence

Eca-Mir-2483_3p

mirBase accessionNone
Sequence
37- AACAUCUAGUUGGUUGAGAGAAU -60
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