MirGeneDB ID | Eca-Mir-2483 |
Family name |
MIR-2483 (all species) |
Seed |
CUGUCAA |
Species |
Horse (Equus caballus) |
MiRBase ID |
eca-mir-2483
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Paralogues |
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Orthologues |
Bta-Mir-2483
Cfa-Mir-2483
Dno-Mir-2483
Ete-Mir-2483
Laf-Mir-2483
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Node of Origin (locus) |
Eutheria
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Node of Origin (family) |
Eutheria
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Genome context (GCA_002863925.1_EquCab3.0) |
CM009179.1: 103584119-103584178 [-]
UCSC
Ensembl
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Precursor (pre-Mir +30nt flank) |
AGAUGACACCCAAAAAUGUGAGUGAAAAGUUCUGUCAACCAUCCAGCUGUUUGGGGUGAUGCAAACAAACAUCUAGUUGGUUGAGAGAAUUUUUUACUUAGUCUCUGGGUGUUUUGGAGU
Get precursor sequence
|
Structure | 10 20 30 40 50
AGAUGACACCCAAAAAUG--| G UCC C GGGUG
UGAGUGAAAAGUUCU UCAACCA AG UGUUUG A
AUUCAUUUUUUAAGA AGUUGGU UC ACAAAC U
UGAGGUUUUGUGGGUCUCUG^ G UGA U AAACG
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
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Motifs | UG at 5p(-14) |
Tissue expression
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Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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Mature sequence |
Eca-Mir-2483_5p |
mirBase accession | MIMAT0034700 |
Sequence |
0- UCUGUCAACCAUCCAGCUGUUUG -23
Get sequence
|
Co-mature sequence |
Eca-Mir-2483_3p |
mirBase accession | None |
Sequence |
37- AACAUCUAGUUGGUUGAGAGAAU -60
Get sequence
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