| MirGeneDB ID | Eca-Mir-9851 |
|---|
| Family name |
MIR-9851 (all species) |
|---|
| Seed |
GGCACCA |
|---|
| Species |
Horse (Equus caballus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-9851
Cfa-Mir-9851
Ete-Mir-9851
Hsa-Mir-9851
Laf-Mir-9851
Mml-Mir-9851
Mmr-Mir-9851
Ocu-Mir-9851
Pab-Mir-9851
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(GCA_002863925.1_EquCab3.0) |
CM009148.1: 15435331-15435387 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CGGCAACGGCAGCAGAGGCGGUGAGCCCGGCGCUGGCAGUGUUGGUGGCACUCGCACGGUGGCAGUGGCACCAGCACUGGCGGUGGCGGUGGCACCAGCACUGGCGGCGCCUAUACC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CGGCAACGGCAGCAGAG- -| AGC G G G CGCAC
GC GGUG CCG CGCUG CAGUGUUGGUG CACU \
CG CCAC GGC GUGGC GUCACGACCAC GUGA G
CCAUAUCCGCGGCGGUCA A^ GGU G G G CGGUG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Eca-Mir-9851_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- CGCUGGCAGUGUUGGUGGCACU -22
Get sequence
|
|---|
| Mature sequence |
Eca-Mir-9851_3p |
| mirBase accession | None |
|---|
| Sequence |
35- UGGCACCAGCACUGGCGGUGGC -57
Get sequence
|
|---|
