| MirGeneDB ID | Laf-Mir-9851 |
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| Family name |
MIR-9851 (all species) |
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| Seed |
GGCACCA |
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| Species |
African bush elephant (Loxodonta africana) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Bta-Mir-9851
Cfa-Mir-9851
Eca-Mir-9851
Ete-Mir-9851
Hsa-Mir-9851
Mml-Mir-9851
Mmr-Mir-9851
Ocu-Mir-9851
Pab-Mir-9851
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
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Genome context
(GCA_000001905.1_Loxafr3.0) |
GL010037.1: 2394607-2394663 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCGACGUGGCAGCAGAGGCGGUGAGCCCGGCGCUGGCAGUAUUGGUGGCACUUGCAUGGUGGCAGUGGCACCAGCACUGGCGGUGGCGGUGGCACCAGCACUGGCGGCGCCUAUACC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GCGACGUGGCAGCAGAG- -| AGC G G A G UGCAU
GC GGUG CCG CGCUG CAGU UUGGUG CACU \
CG CCAC GGC GUGGC GUCA GACCAC GUGA G
CCAUAUCCGCGGCGGUCA A^ GGU G G C G CGGUG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Laf-Mir-9851_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- CGCUGGCAGUAUUGGUGGCACU -22
Get sequence
|
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| Mature sequence |
Laf-Mir-9851_3p |
| mirBase accession | None |
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| Sequence |
35- UGGCACCAGCACUGGCGGUGGC -57
Get sequence
|
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