| MirGeneDB ID | Laf-Mir-9851 |
|---|---|
| Family name | MIR-9851 (all species) |
| Seed | GGCACCA |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-9851 Cfa-Mir-9851 Eca-Mir-9851 Ete-Mir-9851 Hsa-Mir-9851 Mml-Mir-9851 Mmr-Mir-9851 Ocu-Mir-9851 Pab-Mir-9851 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010037.1: 2394607-2394663 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GCGACGUGGCAGCAGAGGCGGUGAGCCCGGCGCUGGCAGUAUUGGUGGCACUUGCAUGGUGGCAGUGGCACCAGCACUGGCGGUGGCGGUGGCACCAGCACUGGCGGCGCCUAUACCGet precursor sequence |
| Structure | 10 20 30 40 50 GCGACGUGGCAGCAGAG- -| AGC G G A G UGCAU GC GGUG CCG CGCUG CAGU UUGGUG CACU \ CG CCAC GGC GUGGC GUCA GACCAC GUGA G CCAUAUCCGCGGCGGUCA A^ GGU G G C G CGGUG 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Laf-Mir-9851_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CGCUGGCAGUAUUGGUGGCACU -22
Get sequence
|
| Mature sequence | Laf-Mir-9851_3p |
| mirBase accession | None |
| Sequence |
35- UGGCACCAGCACUGGCGGUGGC -57
Get sequence
|
