MirGeneDB 3.0
MirGeneDB ID

Egr-Mir-124-o9

Family name MIR-124 (all species)
Seed AAGGCAC
Species Hydatid worm (Echinococcus granulosus)
MiRBase ID egr-mir-124a
Paralogues Egr-Mir-124-o8 
Orthologues Aae-Mir-124  Aga-Mir-124  Agr-Mir-124  Asu-Mir-124  Bfl-Mir-124  Bge-Mir-124  Bko-Mir-124  Bla-Mir-124  Bpl-Mir-124  Cbr-Mir-124-P9  Cel-Mir-124  Cte-Mir-124  Dan-Mir-124  Dlo-Mir-124  Dma-Mir-124  Dme-Mir-124  Dmo-Mir-124  Dpu-Mir-124  Dsi-Mir-124  Dya-Mir-124  Eba-Mir-124  Esc-Mir-124  Gpa-Mir-124  Gsp-Mir-124  Hme-Mir-124  Hru-Mir-124  Isc-Mir-124  Lan-Mir-124  Lhy-Mir-124  Llo-Mir-124  Mom-Mir-124  Npo-Mir-124  Obi-Mir-124  Ofu-Mir-124  Ovu-Mir-124  Pau-Mir-124  Pdu-Mir-124  Pfl-Mir-124  Pmi-Mir-124  Pve-Mir-124  Sko-Mir-124  Sma-Mir-124  Sne-Mir-124  Snu-Mir-124  Spu-Mir-124  Sro-Mir-124  Tca-Mir-124  War-Mir-124  Xbo-Mir-124 
Node of Origin (locus) E. granulosus
Node of Origin (family) Bilateria
Genome context
(GCA_000524195.1_ASM52419v1_Egranulosus)		 APAU02000103.1: 18246-18301 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGUUUGGAACGAUGUCAAGCACGUGAAAUGGCGUUCAACCUCGGAGCCUUUGUCAGCGAUUGAAUUAAGGCACGCGGUGAAUGCCAAAUGCGAUGCUCCACACAUCCUCCUUCAUU
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Structure
        10          20         30        40        50        
AGUUUGGAACGAUGUCA--    -|   AAA         A  U  GA     UGUCAGC 
                   AGCA CGUG   UGGCGUUCA CC CG  GCCUU       G
                   UCGU GCGU   ACCGUAAGU GG GC  CGGAA       A
UUACUUCCUCCUACACACC    A^   AA-         -  C  A-     UUAAGUU 
    110       100        90         80          70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Er Er Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr
Star sequence

Egr-Mir-124-o9_5p*
mirBase accessionMIMAT0037426
Sequence 
0- GCGUUCAACCUCGGAGCCUUUGU -23
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Mature sequence

Egr-Mir-124-o9_3p
mirBase accessionMIMAT0020240
Sequence 
35- UAAGGCACGCGGUGAAUGCCA -56
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