MirGeneDB 2.1

MirGeneDB ID

Emu-Mir-2015

Family name MIR-2015 (all species)
Seed CAUGUAU
Species Muellers freshwater sponge (Ephydatia muelleri)
MiRBase ID
Paralogues
Orthologues Aqu-Mir-2015 
Node of Origin (locus) Demospongiae
Node of Origin (family) Demospongiae
Genome context
(GCA_013339895_Emu)
JABACO010000002.1: 17506160-17506226 [-]
Precursor
(pre-Mir +30nt flank)
UUGGCGACAUGGAUAAAGAGCAGUGUCUUGUCAUGUAUUGUGGAGGGGAGAGGGUCAAAUGUGGCCACACUUCCUCUCCUCUUCAUAAUGCAUGCCAAGGCCUUCUUUUGACAUCCGGCAGCUCACA
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Structure
        10           20        30        40        50        60   
UUGGCGACAUGGAUAAA---|  C  U      U                    GGGUCAAAUGU 
                    GAG AG GUCUUG CAUGUAUUGUGGAGGGGAGA           \
                    UUC UC CGGAAC GUACGUAAUACUUCUCCUCU           G
ACACUCGACGGCCUACAGUU^  U  -      C                    CCUUCACACCG 
     120       110        100        90        80        70
Deep sequencing
3' NTU No
MotifsNo
Tissue expression
 +
Ad Ge Ju
Mature sequence

Emu-Mir-2015_5p (predicted)

mirBase accessionNone
Sequence
0- UCAUGUAUUGUGGAGGGGAGA -21
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Star sequence

Emu-Mir-2015_3p* (predicted)

mirBase accessionNone
Sequence
46- UCCUCUUCAUAAUGCAUGCCA -67
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