MirGeneDB ID | Esc-Mir-12526-v2 |
---|---|
Family name | MIR-12526 (all species) |
Seed | UUUCCCG |
Species | Hawaiian bobtail squid (Euprymna scolopes) |
MiRBase ID | |
Paralogues | Esc-Mir-12526-v1 |
Orthologues | Obi-Mir-12526-v2 Ovu-Mir-12526-v2 |
Node of Origin (locus) | Coleoidea |
Node of Origin (family) | Coleoidea |
Genome context (GCA_004765925.1_miRNA_LOCI) |
|
Precursor (pre-Mir +30nt flank) | AGGCUUUUUCGGAAGGGGAAAAAUUUGAAAGUUUCUUUUUUCCCGCCGAAAAAGCCUGCGet precursor sequence |
Structure | 10 20 --| AA UUUGA AGGCUUUUUCGG GGGGAAAAA A UCCGAAAAAGCC CCCUUUUUU A CG^ G- CUUUG 50 40 30 |
Deep sequencing | |
3' NTU | No |
Motifs | No |
Star sequence | Esc-Mir-12526-v2_5p* (predicted) |
mirBase accession | None |
Sequence |
0- AGGCUUUUUCGGAAGGGGAAAAA -23
Get sequence
|
Mature sequence | Esc-Mir-12526-v2_3p |
mirBase accession | None |
Sequence |
37- UUUUCCCGCCGAAAAAGCCUGC -59
Get sequence
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