| MirGeneDB ID | Obi-Mir-12526-v2 |
|---|
| Family name |
MIR-12526 (all species) |
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| Seed |
UUUCCCG |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
Obi-Mir-12526-v1
|
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| Orthologues |
Esc-Mir-12526-v2
Ovu-Mir-12526-v2
|
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| Node of Origin (locus) |
Coleoidea
|
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| Node of Origin (family) |
Coleoidea
|
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Genome context
(PRJNA270931_OBI) |
KQ419643: 483042-483100 [-]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
GGUACUGAUGACAAUGAUGGCUUGGCAGACAGACCUUUUCAGAAGGGGAAAAAUUAGGUUUCUCCAUUUUUCCCGCUGAAAAAGCCUUCCUGCCAAGACUCCUACCCAGGUUGUCAACG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGUACUGAUGACAAUGAU- -| AC ACC AA AUUAGG
GG CUUGGCAG AG UUUUCAG GGGGAAAA U
UC GAACCGUC UC AAAAGUC CCCUUUUU U
GCAACUGUUGGACCCAUCC A^ CU CGA G- ACCUCU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Obi-Mir-12526-v2_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- AGACCUUUUCAGAAGGGGAAAAA -23
Get sequence
|
|---|
| Mature sequence |
Obi-Mir-12526-v2_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UUUUCCCGCUGAAAAAGCCUUC -59
Get sequence
|
|---|
