| MirGeneDB ID | Esc-Mir-12551 |
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| Family name |
MIR-12551 (all species) |
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| Seed |
GCUAGCA |
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| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Obi-Mir-12551
Ovu-Mir-12551
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| Node of Origin (locus) |
Coleoidea
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| Node of Origin (family) |
Coleoidea
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Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Novel-56_pre_SRIE01058715.1:858196-858340: 45-101 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CUGUCUUGGUACUCCAGAGGCACGCUGGUCUGCUAGCAAUCUAUCGUGGUUAUGUAUUGUCCUCCACCACGCUGGUAUGCUGACAGUCUAUCGUGGCUACUACUCAUCCUGUUCUCA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CUGUCUUGGUACUCCAG--| G C U C AU U UAUGUAU
AG CACG UGG CUG UAGCA CUA CGUGGU \
UC GUGC AUC GAC GUCGU GGU GCACCA U
ACUCUUGUCCUACUCAUCA^ G U U A AU C CCUCCUG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Mature sequence |
Esc-Mir-12551_5p |
| mirBase accession | None |
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| Sequence |
0- UGCUAGCAAUCUAUCGUGGUUA -22
Get sequence
|
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| Co-mature sequence |
Esc-Mir-12551_3p |
| mirBase accession | None |
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| Sequence |
35- ACCACGCUGGUAUGCUGACAGU -57
Get sequence
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