| MirGeneDB ID | Hme-Mir-10485 |
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| Family name |
MIR-10485 (all species) |
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| Seed |
CAGUCUA |
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| Species |
Longwing butterfly (Heliconius melpomene) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
H. melpomene
|
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| Node of Origin (family) |
H. melpomene
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Genome context
(Hmel_1) |
HE670498: 254375-254430 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AUAAACUGAAGAAAAUUCGUCGCGAUCCGAACAGUCUACCCGGACAGGCCGACUUGCGCGCGUCGCCCUGCCCGGAUAGACAGUCCGGAUUGUAGACGCCGUUCGGCACUGGCCUC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AUAAACUGAAGAAAAUU- -| A A C A C ACUUG
CGUC GCGAUCCG AC GUCUA CCGG CAGG CG C
GCAG UGUUAGGC UG CAGAU GGCC GUCC GC G
CUCCGGUCACGGCUUGCC A^ C A A C C UGCGC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Hme-Mir-10485_5p |
| mirBase accession | None |
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| Sequence |
0- ACAGUCUACCCGGACAGGCCG -21
Get sequence
|
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| Star sequence |
Hme-Mir-10485_3p* |
| mirBase accession | None |
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| Sequence |
35- CCCUGCCCGGAUAGACAGUCC -56
Get sequence
|
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