MirGeneDB 3.0

54 microRNA genes with node of origin H. melpomene
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Hme-Mir-3-P14 None MIR-3 CACUGGG None None HE671859 113699 113757 - H. melpomene Pancrustacea No 1
Hme-Mir-3-P15 None MIR-3 CACUGGG None None HE671859 113451 113508 - H. melpomene Pancrustacea No 1 1
Hme-Mir-3-P16 None MIR-3 CACUGGG None None HE671859 113306 113364 - H. melpomene Pancrustacea No 1 1
Hme-Mir-3-P17 None MIR-3 CACUGGG None None HE671859 113173 113233 - H. melpomene Pancrustacea No 1
Hme-Mir-3-P18 None MIR-3 CACUGGG None None HE671859 112729 112787 - H. melpomene Pancrustacea No 1
Hme-Mir-3-P19 None MIR-3 CACUGGG None None HE671859 112455 112513 - H. melpomene Pancrustacea No 1
Hme-Mir-3-P20 None MIR-3 CACUGGG None None HE671859 112283 112342 - H. melpomene Pancrustacea No
Hme-Mir-3-P21 None MIR-3 CACUGGG None None HE671859 112176 112234 - H. melpomene Pancrustacea No 1
Hme-Mir-3-P22 None MIR-3 CACUGGU None None HE671859 111736 111797 - H. melpomene Pancrustacea No 1
Hme-Mir-3-P23 None MIR-3 UAGUCAU None None HE671859 111487 111543 - H. melpomene Pancrustacea No 1
Hme-Mir-3-P24 None MIR-3 CACUGGG None None HE671859 110937 110990 - H. melpomene Pancrustacea No 1
Hme-Mir-3-P25 None MIR-3 CACUGGG None None HE671859 110796 110850 - H. melpomene Pancrustacea No 1
Hme-Mir-3-P26 None MIR-3 CACUGGG None None HE671859 110635 110693 - H. melpomene Pancrustacea No
Hme-Mir-3-P27 hme-mir-2733 MIR-3 CACUGGG None MIMAT0024951 HE671859 110477 110535 - H. melpomene Pancrustacea Unknown
Hme-Mir-33-P8 hme-mir-33-1 MIR-33 UGCAUUG MIMAT0024980 None HE670818 67948 68008 + H. melpomene Bilateria No 1
Hme-Mir-33-P9 hme-mir-33-2 MIR-33 UGCAUUG MIMAT0024980 None HE671035 83696 83756 - H. melpomene Bilateria No 1
Hme-Mir-34-P11 hme-mir-34-1 MIR-34 GGCAGUG MIMAT0024983 None HE667979 380 438 - H. melpomene Bilateria No 1
Hme-Mir-34-P12 hme-mir-34-2 MIR-34 GGCAGUG MIMAT0024983 None HE669997 8038 8096 + H. melpomene Bilateria No 1 1
Hme-Mir-210-P3 hme-mir-210 MIR-210 UUGUGCG None MIMAT0024947 HE670563 209742 209798 - H. melpomene Bilateria No 1
Hme-Mir-210-P4 hme-mir-3286 MIR-210 UGUGCGU None MIMAT0024979 HE670563 208640 208703 - H. melpomene Bilateria No 1
Hme-Mir-279-o1 hme-mir-279a MIR-279 GACUAGA None MIMAT0024961 HE668381 19337 19392 - H. melpomene Protostomia No 1
Hme-Mir-279-o2 hme-mir-279c MIR-279 GACUAGA None MIMAT0024966 HE671887 111974 112030 + H. melpomene Protostomia No 1 1
Hme-Mir-989-P1 None MIR-989 GUGAUGU None None FARY01123984.1 1726 1785 - H. melpomene Endopterygota No 1
Hme-Mir-989-P2 None MIR-989 GUGAUGU None None FARY01123984.1 1092 1151 - H. melpomene Endopterygota No 1
Hme-Mir-2755 hme-mir-2755 MIR-2755 ACCCUGU None MIMAT0024952 HE671518 150664 150723 - H. melpomene H. melpomene No
Hme-Mir-2756 hme-mir-2756 MIR-2756 CCCUGUA MIMAT0024953 None HE672079 296638 296695 + H. melpomene H. melpomene No 1
Hme-Mir-2763-v1 hme-mir-2763 MIR-2763 AUUAUGC None MIMAT0024955 HE672065 139460 139521 - H. melpomene H. melpomene No 1 1
Hme-Mir-2763-v2 hme-mir-2763 MIR-2763 UAUUAUG None MIMAT0024955 HE672065 139460 139521 - H. melpomene H. melpomene No 1
Hme-Mir-2766-P1 None MIR-2766 CAGUCUU None None HE670389 111848 111906 + H. melpomene H. melpomene No 1
Hme-Mir-2766-P2 None MIR-2766 CAGUCUU None None HE670430 103144 103202 - H. melpomene H. melpomene No 1
Hme-Mir-2767 hme-mir-2767 MIR-2767 AAGUAAA MIMAT0024957 None HE671115 285746 285800 + H. melpomene H. melpomene No 1
Hme-Mir-2786 None MIR-2786 UCUCUCG None None HE671033 61257 61318 + H. melpomene H. melpomene Unknown 1 1
Hme-Mir-3327 hme-mir-3327 MIR-3327 UAUGUAA MIMAT0024981 None HE671311 86391 86452 - H. melpomene H. melpomene No 1
Hme-Mir-3338 hme-mir-3338 MIR-3338 UGUACUU None MIMAT0024982 HE671311 86526 86586 - H. melpomene H. melpomene No 1
Hme-Mir-6301-P1 hme-mir-6301-2 MIR-6301 CAGUUCA MIMAT0026470 MIMAT0025005 HE671389 229572 229629 - H. melpomene H. melpomene No 1 1
Hme-Mir-6301-P2 hme-mir-6301-1 MIR-6301 CAGUUCA MIMAT0025004 MIMAT0025005 HE671389 229326 229379 - H. melpomene H. melpomene No 1 1
Hme-Mir-6302-P1 hme-mir-6302-2 MIR-6302 AAACUCA MIMAT0026464 MIMAT0025007 HE671389 230471 230526 - H. melpomene H. melpomene No 1
Hme-Mir-6302-P2 hme-mir-6302-1 MIR-6302 AAACUCA MIMAT0025006 MIMAT0025007 HE671389 229935 229991 - H. melpomene H. melpomene No 1
Hme-Mir-6304 hme-mir-6304 MIR-6304 UUCCAGU None MIMAT0025009 HE670412 210116 210172 + H. melpomene H. melpomene No 1 1
Hme-Mir-6305 hme-mir-6305 MIR-6305 UAUGCUA MIMAT0025010 MIMAT0025011 HE670942 235843 235906 - H. melpomene H. melpomene No 1
Hme-Mir-6307 hme-mir-6307 MIR-6307 AAGCUCG None MIMAT0025014 HE670993 20663 20723 - H. melpomene H. melpomene No 1
Hme-Mir-10485 None MIR-10485 CAGUCUA None None HE670498 254375 254430 + H. melpomene H. melpomene No 1
Hme-Novel-1 None HME-NOVEL-1 UUCGCCU None None HE672018 201434 201493 + H. melpomene H. melpomene No 1
Hme-Novel-2 None HME-NOVEL-2 CCAAUAA None None HE671335 621364 621419 + H. melpomene H. melpomene No
Hme-Novel-3 None HME-NOVEL-3 GCGGAGA None None HE671335 621504 621559 - H. melpomene H. melpomene No 1
Hme-Novel-4 None HME-NOVEL-4 UGAUGAU None None HE671687 151159 151219 + H. melpomene H. melpomene No 1
Hme-Novel-5-P1 None HME-NOVEL-5 UUGCCUU None None HE671980 160985 161040 - H. melpomene H. melpomene No 1
Hme-Novel-5-P2 None HME-NOVEL-5 UUGCCUU None None HE671980 160796 160851 - H. melpomene H. melpomene No 1 1
Hme-Novel-5-P3a None HME-NOVEL-5 UUGCCUU None None HE671980 160606 160661 - H. melpomene H. melpomene No 1 1
Hme-Novel-5-P3b None HME-NOVEL-5 UUGCCUU None None HE671980 160418 160473 - H. melpomene H. melpomene No 1 1
Hme-Novel-5-P4 None HME-NOVEL-5 UUGCCUU None None HE671980 160228 160283 - H. melpomene H. melpomene No 1 1
Hme-Novel-5-P5 None HME-NOVEL-5 UUGCCUU None None HE671980 159936 159991 - H. melpomene H. melpomene No 1 1
Hme-Novel-6 None HME-NOVEL-6 AGUCGAG None None HE672042 72357 72421 + H. melpomene H. melpomene No
Hme-Novel-7 None HME-NOVEL-7 UGCGUUG None None HE672065 650060 650136 - H. melpomene H. melpomene No 1

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