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54 microRNA genes with node of origin H. melpomene
Sort by genome coordinates
Motifs
MirGeneDB ID
▲
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
3' NTU
UG
UGUG
CNNC
Hme-Mir-3-P14
None
MIR-3
CACUGGG
None
None
HE671859
113699
113757
-
H. melpomene
Pancrustacea
No
1
Hme-Mir-3-P15
None
MIR-3
CACUGGG
None
None
HE671859
113451
113508
-
H. melpomene
Pancrustacea
No
1
1
Hme-Mir-3-P16
None
MIR-3
CACUGGG
None
None
HE671859
113306
113364
-
H. melpomene
Pancrustacea
No
1
1
Hme-Mir-3-P17
None
MIR-3
CACUGGG
None
None
HE671859
113173
113233
-
H. melpomene
Pancrustacea
No
1
Hme-Mir-3-P18
None
MIR-3
CACUGGG
None
None
HE671859
112729
112787
-
H. melpomene
Pancrustacea
No
1
Hme-Mir-3-P19
None
MIR-3
CACUGGG
None
None
HE671859
112455
112513
-
H. melpomene
Pancrustacea
No
1
Hme-Mir-3-P20
None
MIR-3
CACUGGG
None
None
HE671859
112283
112342
-
H. melpomene
Pancrustacea
No
Hme-Mir-3-P21
None
MIR-3
CACUGGG
None
None
HE671859
112176
112234
-
H. melpomene
Pancrustacea
No
1
Hme-Mir-3-P22
None
MIR-3
CACUGGU
None
None
HE671859
111736
111797
-
H. melpomene
Pancrustacea
No
1
Hme-Mir-3-P23
None
MIR-3
UAGUCAU
None
None
HE671859
111487
111543
-
H. melpomene
Pancrustacea
No
1
Hme-Mir-3-P24
None
MIR-3
CACUGGG
None
None
HE671859
110937
110990
-
H. melpomene
Pancrustacea
No
1
Hme-Mir-3-P25
None
MIR-3
CACUGGG
None
None
HE671859
110796
110850
-
H. melpomene
Pancrustacea
No
1
Hme-Mir-3-P26
None
MIR-3
CACUGGG
None
None
HE671859
110635
110693
-
H. melpomene
Pancrustacea
No
Hme-Mir-3-P27
hme-mir-2733
MIR-3
CACUGGG
None
MIMAT0024951
HE671859
110477
110535
-
H. melpomene
Pancrustacea
Unknown
Hme-Mir-33-P8
hme-mir-33-1
MIR-33
UGCAUUG
MIMAT0024980
None
HE670818
67948
68008
+
H. melpomene
Bilateria
No
1
Hme-Mir-33-P9
hme-mir-33-2
MIR-33
UGCAUUG
MIMAT0024980
None
HE671035
83696
83756
-
H. melpomene
Bilateria
No
1
Hme-Mir-34-P11
hme-mir-34-1
MIR-34
GGCAGUG
MIMAT0024983
None
HE667979
380
438
-
H. melpomene
Bilateria
No
1
Hme-Mir-34-P12
hme-mir-34-2
MIR-34
GGCAGUG
MIMAT0024983
None
HE669997
8038
8096
+
H. melpomene
Bilateria
No
1
1
Hme-Mir-210-P3
hme-mir-210
MIR-210
UUGUGCG
None
MIMAT0024947
HE670563
209742
209798
-
H. melpomene
Bilateria
No
1
Hme-Mir-210-P4
hme-mir-3286
MIR-210
UGUGCGU
None
MIMAT0024979
HE670563
208640
208703
-
H. melpomene
Bilateria
No
1
Hme-Mir-279-o1
hme-mir-279a
MIR-279
GACUAGA
None
MIMAT0024961
HE668381
19337
19392
-
H. melpomene
Protostomia
No
1
Hme-Mir-279-o2
hme-mir-279c
MIR-279
GACUAGA
None
MIMAT0024966
HE671887
111974
112030
+
H. melpomene
Protostomia
No
1
1
Hme-Mir-989-P1
None
MIR-989
GUGAUGU
None
None
FARY01123984.1
1726
1785
-
H. melpomene
Endopterygota
No
1
Hme-Mir-989-P2
None
MIR-989
GUGAUGU
None
None
FARY01123984.1
1092
1151
-
H. melpomene
Endopterygota
No
1
Hme-Mir-2755
hme-mir-2755
MIR-2755
ACCCUGU
None
MIMAT0024952
HE671518
150664
150723
-
H. melpomene
H. melpomene
No
Hme-Mir-2756
hme-mir-2756
MIR-2756
CCCUGUA
MIMAT0024953
None
HE672079
296638
296695
+
H. melpomene
H. melpomene
No
1
Hme-Mir-2763-v1
hme-mir-2763
MIR-2763
AUUAUGC
None
MIMAT0024955
HE672065
139460
139521
-
H. melpomene
H. melpomene
No
1
1
Hme-Mir-2763-v2
hme-mir-2763
MIR-2763
UAUUAUG
None
MIMAT0024955
HE672065
139460
139521
-
H. melpomene
H. melpomene
No
1
Hme-Mir-2766-P1
None
MIR-2766
CAGUCUU
None
None
HE670389
111848
111906
+
H. melpomene
H. melpomene
No
1
Hme-Mir-2766-P2
None
MIR-2766
CAGUCUU
None
None
HE670430
103144
103202
-
H. melpomene
H. melpomene
No
1
Hme-Mir-2767
hme-mir-2767
MIR-2767
AAGUAAA
MIMAT0024957
None
HE671115
285746
285800
+
H. melpomene
H. melpomene
No
1
Hme-Mir-2786
None
MIR-2786
UCUCUCG
None
None
HE671033
61257
61318
+
H. melpomene
H. melpomene
Unknown
1
1
Hme-Mir-3327
hme-mir-3327
MIR-3327
UAUGUAA
MIMAT0024981
None
HE671311
86391
86452
-
H. melpomene
H. melpomene
No
1
Hme-Mir-3338
hme-mir-3338
MIR-3338
UGUACUU
None
MIMAT0024982
HE671311
86526
86586
-
H. melpomene
H. melpomene
No
1
Hme-Mir-6301-P1
hme-mir-6301-2
MIR-6301
CAGUUCA
MIMAT0026470
MIMAT0025005
HE671389
229572
229629
-
H. melpomene
H. melpomene
No
1
1
Hme-Mir-6301-P2
hme-mir-6301-1
MIR-6301
CAGUUCA
MIMAT0025004
MIMAT0025005
HE671389
229326
229379
-
H. melpomene
H. melpomene
No
1
1
Hme-Mir-6302-P1
hme-mir-6302-2
MIR-6302
AAACUCA
MIMAT0026464
MIMAT0025007
HE671389
230471
230526
-
H. melpomene
H. melpomene
No
1
Hme-Mir-6302-P2
hme-mir-6302-1
MIR-6302
AAACUCA
MIMAT0025006
MIMAT0025007
HE671389
229935
229991
-
H. melpomene
H. melpomene
No
1
Hme-Mir-6304
hme-mir-6304
MIR-6304
UUCCAGU
None
MIMAT0025009
HE670412
210116
210172
+
H. melpomene
H. melpomene
No
1
1
Hme-Mir-6305
hme-mir-6305
MIR-6305
UAUGCUA
MIMAT0025010
MIMAT0025011
HE670942
235843
235906
-
H. melpomene
H. melpomene
No
1
Hme-Mir-6307
hme-mir-6307
MIR-6307
AAGCUCG
None
MIMAT0025014
HE670993
20663
20723
-
H. melpomene
H. melpomene
No
1
Hme-Mir-10485
None
MIR-10485
CAGUCUA
None
None
HE670498
254375
254430
+
H. melpomene
H. melpomene
No
1
Hme-Novel-1
None
HME-NOVEL-1
UUCGCCU
None
None
HE672018
201434
201493
+
H. melpomene
H. melpomene
No
1
Hme-Novel-2
None
HME-NOVEL-2
CCAAUAA
None
None
HE671335
621364
621419
+
H. melpomene
H. melpomene
No
Hme-Novel-3
None
HME-NOVEL-3
GCGGAGA
None
None
HE671335
621504
621559
-
H. melpomene
H. melpomene
No
1
Hme-Novel-4
None
HME-NOVEL-4
UGAUGAU
None
None
HE671687
151159
151219
+
H. melpomene
H. melpomene
No
1
Hme-Novel-5-P1
None
HME-NOVEL-5
UUGCCUU
None
None
HE671980
160985
161040
-
H. melpomene
H. melpomene
No
1
Hme-Novel-5-P2
None
HME-NOVEL-5
UUGCCUU
None
None
HE671980
160796
160851
-
H. melpomene
H. melpomene
No
1
1
Hme-Novel-5-P3a
None
HME-NOVEL-5
UUGCCUU
None
None
HE671980
160606
160661
-
H. melpomene
H. melpomene
No
1
1
Hme-Novel-5-P3b
None
HME-NOVEL-5
UUGCCUU
None
None
HE671980
160418
160473
-
H. melpomene
H. melpomene
No
1
1
Hme-Novel-5-P4
None
HME-NOVEL-5
UUGCCUU
None
None
HE671980
160228
160283
-
H. melpomene
H. melpomene
No
1
1
Hme-Novel-5-P5
None
HME-NOVEL-5
UUGCCUU
None
None
HE671980
159936
159991
-
H. melpomene
H. melpomene
No
1
1
Hme-Novel-6
None
HME-NOVEL-6
AGUCGAG
None
None
HE672042
72357
72421
+
H. melpomene
H. melpomene
No
Hme-Novel-7
None
HME-NOVEL-7
UGCGUUG
None
None
HE672065
650060
650136
-
H. melpomene
H. melpomene
No
1
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