MirGeneDB 3.0
MirGeneDB ID

Hme-Mir-33-P9

Family name MIR-33 (all species)
Seed UGCAUUG
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID hme-mir-33-2
Paralogues Hme-Mir-33-P8 
Orthologues Aae-Mir-33  Aga-Mir-33  Ava-Mir-33  Bge-Mir-33  Cin-Mir-33  Csc-Mir-33  Cte-Mir-33  Dan-Mir-33  Dgr-Mir-33  Dlo-Mir-33  Dma-Mir-33  Dme-Mir-33  Dmo-Mir-33  Dpu-Mir-33  Dsi-Mir-33  Dya-Mir-33  Eba-Mir-33  Ebu-Mir-33  Efe-Mir-33  Egr-Mir-33  Esc-Mir-33  Gpa-Mir-33  Gsp-Mir-33  Hru-Mir-33  Isc-Mir-33  Lgi-Mir-33  Llo-Mir-33  Mgi-Mir-33  Mom-Mir-33  Npo-Mir-33  Obi-Mir-33  Ofu-Mir-33  Ovu-Mir-33  Pau-Mir-33  Pca-Mir-33  Pcr-Mir-33  Pdu-Mir-33  Pfl-Mir-33  Pmi-Mir-33  Sko-Mir-33  Snu-Mir-33  Spu-Mir-33  Tca-Mir-33  War-Mir-33  Xbo-Mir-33 
Node of Origin (locus) H. melpomene
Node of Origin (family) Bilateria
Genome context
(Hmel_1)		 HE671035: 83696-83756 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UAUAUUAUUUGAAGACAAACUAUUGCGAGAGUGCAUUGUAGUUGCAUUGCACUUGUUAUUUAUUAUGUGCAAUAUUUCUACAAAGCAAAUCUCGCUCUAGUUGCUUUCGUCAUACAUACGU
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Structure
        10          20        30         40        50         
UAUAUUAUUUGAAGACA--     UU      G-|  A      UUGC      CUUGUUA 
                   AACUA  GCGAGA  UGC UUGUAG    AUUGCA       U
                   UUGAU  CGCUCU  ACG AACAUC    UAACGU       U
UGCAUACAUACUGCUUUCG     CU      AA^  A      UUUA      GUAUUAU 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Fe Fe Fe Fe Ma Ma
Mature sequence

Hme-Mir-33-P9_5p
mirBase accessionMIMAT0024980
Sequence 
0- GUGCAUUGUAGUUGCAUUGCA -21
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Star sequence

Hme-Mir-33-P9_3p*
mirBase accessionNone
Sequence 
39- CAAUAUUUCUACAAAGCAAAUC -61
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