MirGeneDB 3.0
MirGeneDB ID

Hme-Mir-6301-P1

Family name MIR-6301 (all species)
Seed CAGUUCA
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID hme-mir-6301-2
Paralogues Hme-Mir-6301-P2 
Orthologues
Node of Origin (locus) H. melpomene
Node of Origin (family) H. melpomene
Genome context
(Hmel_1)		 HE671389: 229572-229629 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-6301-P1)		 Mir-6301-P2 HE671389: 229326-229379 [-] Ensembl
Mir-6301-P1 HE671389: 229572-229629 [-] Ensembl
Mir-6302-P2 HE671389: 229935-229991 [-] Ensembl
Mir-6302-P1 HE671389: 230471-230526 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAAUGUAAAGAACAUAUAUCAUGCGAAGUAGCGUCAGACGGGGAAUUGGUAUGUUGCAAGUUCUACCAGUUCAUCGUCUGACGUUUAAGUUCCCAUGAACCUUCAUCAGGACAAAAG
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Structure
        10        20        30          40        50        
AAAAUGUAAAGAACAUAUA     C   GU--|          GG         UGUUG 
                   UCAUG GAA    AGCGUCAGACG  GAAUUGGUA     C
                   AGUAC CUU    UUGCAGUCUGC  CUUGACCAU     A
GAAAACAGGACUACUUCCA     C   GAAU^          UA         CUUGA 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ad Fe Fe Fe Fe Ma Ma
Star sequence

Hme-Mir-6301-P1_5p*
mirBase accessionMIMAT0026470
Sequence 
0- AGCGUCAGACGGGGAAUUGGUA -22
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Mature sequence

Hme-Mir-6301-P1_3p
mirBase accessionMIMAT0025005
Sequence 
36- CCAGUUCAUCGUCUGACGUUUA -58
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