MirGeneDB 3.0

MirGeneDB ID

Hme-Mir-6302-P2

Family name MIR-6302 (all species)
Seed AAACUCA
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID hme-mir-6302-1
Paralogues Hme-Mir-6302-P1 
Orthologues
Node of Origin (locus) H. melpomene
Node of Origin (family) H. melpomene
Genome context
(Hmel_1)
HE671389: 229935-229991 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-6302-P2)
Mir-6301-P2 HE671389: 229326-229379 [-] Ensembl
Mir-6301-P1 HE671389: 229572-229629 [-] Ensembl
Mir-6302-P2 HE671389: 229935-229991 [-] Ensembl
Mir-6302-P1 HE671389: 230471-230526 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UAAGAAAAUAGAAGAGAUUGUAAGAUGCGAAGACUGACGGGGGGCUUGCACAUUUCCAUUUAUUGCAAACUCAUCGUCAGCCUUCUCGCAUUUUAUAAUAAAUCUACUAAAAGUAUA
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Structure
        10          20        30          40        50       
UAAGAAAAUAGAAGAGA--             --| A      GG   C     CAUUUC 
                   UUGUAAGAUGCGA  AG CUGACG  GGG UUGCA      \
                   AAUAUUUUACGCU  UC GACUGC  CUC AACGU      C
AUAUGAAAAUCAUCUAAAU             CU^ C      UA   A     UAUUUA 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Fe Fe Fe Fe Ma Ma
Star sequence

Hme-Mir-6302-P2_5p*

mirBase accessionMIMAT0025006
Sequence
0- AGACUGACGGGGGGCUUGCA -20
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Mature sequence

Hme-Mir-6302-P2_3p

mirBase accessionMIMAT0025007
Sequence
35- CAAACUCAUCGUCAGCCUUCUC -57
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