MirGeneDB 3.0
MirGeneDB ID

Hme-Mir-6301-P2

Family name MIR-6301 (all species)
Seed CAGUUCA
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID hme-mir-6301-1
Paralogues Hme-Mir-6301-P1 
Orthologues
Node of Origin (locus) H. melpomene
Node of Origin (family) H. melpomene
Genome context
(Hmel_1)		 HE671389: 229326-229379 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-6301-P2)		 Mir-6301-P2 HE671389: 229326-229379 [-] Ensembl
Mir-6301-P1 HE671389: 229572-229629 [-] Ensembl
Mir-6302-P2 HE671389: 229935-229991 [-] Ensembl
Mir-6302-P1 HE671389: 230471-230526 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UCAGAAAUGGAUGUCCUGCAUACGAGGUUACGUCAUACGAAGAAUUGGUAUGUUAAGUUUUACCAGUUCAUCGUCUGACGUUUAACUUCCUAUGAACUACUUUCAGAAAAUUGC
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Structure
        10          20          30        40        50     
UCAGAAAUGGAUGUCCUG--    C      --|     U    A         UGUU 
                    CAUA GAGGUU  ACGUCA ACGA GAAUUGGUA    A
                    GUAU CUUCAA  UGCAGU UGCU CUUGACCAU    A
CGUUAAAAGACUUUCAUCAA    C      UU^     C    A         UUUG 
  110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
-   +
Ad Fe Fe Fe Fe Ma Ma
Star sequence

Hme-Mir-6301-P2_5p*
mirBase accessionMIMAT0025004
Sequence 
0- CGUCAUACGAAGAAUUGGUA -20
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Mature sequence

Hme-Mir-6301-P2_3p
mirBase accessionMIMAT0025005
Sequence 
32- CCAGUUCAUCGUCUGACGUUUA -54
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