| MirGeneDB ID | Hme-Novel-4 |
|---|
| Family name |
HME-NOVEL-4 (all species) |
|---|
| Seed |
UGAUGAU |
|---|
| Species |
Longwing butterfly (Heliconius melpomene) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
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| Node of Origin (locus) |
H. melpomene
|
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| Node of Origin (family) |
H. melpomene
|
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Genome context
(Hmel_1) |
HE671687: 151159-151219 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AAAUAUCAUUUGUGUUGAUUCUGAUUACUGAUGAUGAUCAUGAUGAUGAAUACAUAUUAAGUGUUUAUAUUCCUCUUCAUAAUCAUCAUCGUCAUCAUCAACCUGUCUUCAUCCACCGCUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAAUAUCAUUUGUGUUGAUUC---| U U C U U CAUAUUA
UGAU AC GAUGAUGAU AUGA GA GAAUA \
ACUA UG CUACUACUA UACU CU CUUAU A
GUCGCCACCUACUUCUGUCCAACU^ C - A U C AUUUGUG
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Hme-Novel-4_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AUGAUGAUCAUGAUGAUGAAUA -22
Get sequence
|
|---|
| Co-mature sequence |
Hme-Novel-4_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UUCCUCUUCAUAAUCAUCAUCG -61
Get sequence
|
|---|
