MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-1306

Family name MIR-1306 (all species)
Seed CACCUCC
Species Human (Homo sapiens)
MiRBase ID hsa-mir-1306
Paralogues
Orthologues Aca-Mir-1306  Ami-Mir-1306  Bta-Mir-1306  Cfa-Mir-1306  Cja-Mir-1306  Cli-Mir-1306  Cmi-Mir-1306  Cpi-Mir-1306  Cpo-Mir-1306  Dno-Mir-1306  Dre-Mir-1306  Eca-Mir-1306  Ete-Mir-1306  Gga-Mir-1306  Gja-Mir-1306  Gmo-Mir-1306  Laf-Mir-1306  Lch-Mir-1306  Loc-Mir-1306  Mal-Mir-1306  Mdo-Mir-1306  Mml-Mir-1306  Mmr-Mir-1306  Mmu-Mir-1306  Mun-Mir-1306  Neu-Mir-1306  Oan-Mir-1306  Ocu-Mir-1306  Pab-Mir-1306  Pbv-Mir-1306  Rno-Mir-1306  Sha-Mir-1306  Spt-Mir-1306  Sto-Mir-1306  Tgu-Mir-1306  Tni-Mir-1306  Xla-Mir-1306-P1a  Xla-Mir-1306-P1b  Xtr-Mir-1306 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(hg38)
chr22: 20086072-20086132 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUCCAAGCGCUGCCCCGUGAGCAGUCUCCACCACCUCCCCUGCAAACGUCCAGUGGUGCAGAGGUAAUGGACGUUGGCUCUGGUGGUGAUGGACAGUCCGAACUCCCUGCUGAGGACCCCU
Get precursor sequence
Structure
        10            20         30        40        50          
UUCCAAGCGCUGCCCCG----  AG A    C-|      UCCCCU  A        GUGGUGC 
                     UG  C GUCU  CACCACC      GC AACGUCCA       \
                     GC  G CAGG  GUGGUGG      CG UUGCAGGU       A
UCCCCAGGAGUCGUCCCUCAA  CU A    UA^      UCU---  G        AAUGGAG 
 .       110       100        90        80           70
Deep sequencing
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CommentMir-1306 is an unusual miRNA as it is derived from the 5'-most coding-exon of the DGCR8 gene.
3' NTU Yes
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Mature sequence

Hsa-Mir-1306_5p

mirBase accessionMIMAT0022726
Sequence
0- CCACCUCCCCUGCAAACGUCCA -22
Get sequence
Proposed targets TargetScanVert: hsa-miR-1306-5p
TargetMiner: hsa-miR-1306-5p
miRDB: MIMAT0022726
Star sequence

Hsa-Mir-1306_3p*

mirBase accessionMIMAT0005950
Sequence
39- GACGUUGGCUCUGGUGGUGAUG -61
Get sequence
Proposed targets microrna.org: MIMAT0005950
TargetScanVert: hsa-miR-1306-3p
TargetMiner: hsa-miR-1306-3p
miRDB: MIMAT0005950