MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-1306-P1b

Family name MIR-1306 (all species)
Seed CACCUCC
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-1306-P1a 
Orthologues Aca-Mir-1306  Ami-Mir-1306  Bta-Mir-1306  Cfa-Mir-1306  Cja-Mir-1306  Cli-Mir-1306  Cmi-Mir-1306  Cpi-Mir-1306  Cpo-Mir-1306  Dno-Mir-1306  Dre-Mir-1306  Eca-Mir-1306  Ete-Mir-1306  Gga-Mir-1306  Gja-Mir-1306  Gmo-Mir-1306  Hsa-Mir-1306  Laf-Mir-1306  Lch-Mir-1306  Loc-Mir-1306  Mal-Mir-1306  Mdo-Mir-1306  Mml-Mir-1306  Mmr-Mir-1306  Mmu-Mir-1306  Mun-Mir-1306  Neu-Mir-1306  Oan-Mir-1306  Ocu-Mir-1306  Pab-Mir-1306  Pbv-Mir-1306  Rno-Mir-1306  Sha-Mir-1306  Spt-Mir-1306  Sto-Mir-1306  Tgu-Mir-1306  Tni-Mir-1306  Xtr-Mir-1306 
Node of Origin (locus) X. laevis
Node of Origin (family) Gnathostomata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030724.1: 155490167-155490227 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCACCUCUGCCGCCAGAAGAAGAGCCUCCACCACCUCCCCUGCAAACGUCCAGUGACGCAGAGGUAAUGGACGUUGGCUCUGGUGGUGAUGGACAGUCACAAACCCCAGCUGGGGACCUGC
Get precursor sequence
Structure
        10             20        30        40        50          
CCACCUCUGCCGCCAGAA-----| AGAG  UC       UCCCCU  A        GUGACGC 
                       GA    CC  CACCACC      GC AACGUCCA       \
                       CU    GG  GUGGUGG      CG UUGCAGGU       A
CGUCCAGGGGUCGACCCCAAACA^ GACA  UA       UCU---  G        AAUGGAG 
 .       110       100        90        80           70
Deep sequencing
CommentMir-1306 is an unusual miRNA as it is derived from the 5'-most coding-exon of the DGCR8 gene.
3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Em
Mature sequence

Xla-Mir-1306-P1b_5p
mirBase accessionNone
Sequence 
0- CCACCUCCCCUGCAAACGUCCA -22
Get sequence
Star sequence

Xla-Mir-1306-P1b_3p* (predicted)
mirBase accessionNone
Sequence 
39- GACGUUGGCUCUGGUGGUGAUG -61
Get sequence