MirGeneDB 2.1

MirGeneDB ID

Hsa-Mir-3617

Family name MIR-3617 (all species)
Seed AAGACAU
Species Human (Homo sapiens)
MiRBase ID hsa-mir-3617
Paralogues
Orthologues Mml-Mir-3617 
Node of Origin (locus) Catarrhini
Node of Origin (family) Catarrhini
Genome context
(hg38)
chr20: 45705109-45705171 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAGAGGGAAUUGUCUUACUCAAGGUCAUAGAAAGACAUAGUUGCAAGAUGGGAUUAGAAACCAUAUGUCUCAUCAGCACCCUAUGUCCUUUCUCUGCCCUGGGAGCACACUCCAUUUAGCAGG
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Structure
        10         20         30         40         50        60
AAGAGGGAAUUGUCUUA-   A-   U  U     -       U-|  AA      AUUAGAA 
                  CUC  AGG CA AGAAA GACAUAG  UGC  GAUGGG       A
                  GAG  UCC GU UCUUU CUGUAUC  ACG  CUACUC       C
GGACGAUUUACCUCACAC   GG   C  C     C       CC^  A-      UGUAUAC 
 120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 3- 3- 3- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 5- 5- 5- 5- 5- 5- 5- 6- 6- 6- 6- 6-
Mature sequence

Hsa-Mir-3617_5p

mirBase accessionMIMAT0017997
Sequence
0- AAAGACAUAGUUGCAAGAUGGG -22
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Proposed targets TargetScanVert: hsa-miR-3617-5p
miRDB: MIMAT0017997
Star sequence

Hsa-Mir-3617_3p*

mirBase accessionMIMAT0022966
Sequence
40- CAUCAGCACCCUAUGUCCUUUCU -63
Get sequence
Proposed targets TargetScanVert: hsa-miR-3617-3p
miRDB: MIMAT0022966