| MirGeneDB ID | Pab-Mir-3617 |
|---|---|
| Family name | MIR-3617 (all species) |
| Seed | AAGACAU |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Hsa-Mir-3617 Mml-Mir-3617 |
| Node of Origin (locus) | Catarrhini |
| Node of Origin (family) | Catarrhini |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054700.2: 49985320-49985382 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AAGAGGGAAUUGUCUUACUCAAGGUCAUAGAAAGACAUAGUUGCAAGAUGGGAUUAGAAACCAUAUGUCUCAUCAGCACCCUAUGUGCUUUCUCUGCCCUGGGAGCACACUCCAUUUAGCAGGGet precursor sequence |
| Structure | 10 20 30 40 50 60 AAGAGGGAAUUGUCUUA- A- U U - U-| AA AUUAGAA CUC AGG CA AGAAAG ACAUAG UGC GAUGGG A GAG UCC GU UCUUUC UGUAUC ACG CUACUC C GGACGAUUUACCUCACAC GG C C G CC^ A- UGUAUAC 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Pab-Mir-3617_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- AAAGACAUAGUUGCAAGAUGGG -22
Get sequence
|
| Star sequence | Pab-Mir-3617_3p* (predicted) |
| mirBase accession | None |
| Sequence |
40- CAUCAGCACCCUAUGUGCUUUCU -63
Get sequence
|
