MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-3619

Family name MIR-3619 (all species)
Seed CAGCAGG
Species Human (Homo sapiens)
MiRBase ID hsa-mir-3619
Paralogues
Orthologues
Node of Origin (locus) H. sapiens
Node of Origin (family) H. sapiens
Genome context
(hg38)
chr22: 46091059-46091112 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-3619)
Mir-3619 chr22: 46091059-46091112 [+] UCSC Ensembl
Let-7-P2a2 chr22: 46112752-46112820 [+] UCSC Ensembl
Let-7-P2b2 chr22: 46113691-46113765 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CACACGUCAUCAAAAACGGCAUCUUUGCACUCAGCAGGCAGGCUGGUGCAGCCCGUGGUGGGGGACCAUCCUGCCUGCUGUGGGGUAAGGACGGCUGUGUGCGCCAGGCUACAG
Get precursor sequence
Structure
        10         20         30         40        50      
CACACGUCAUCAAAAAC-   A-       A  -|          C    GCAG CCG 
                  GGC  UCUUUGC CU CAGCAGGCAGG UGGU    C   U
                  UCG  AGGAAUG GG GUCGUCCGUCC ACCA    G   G
GACAUCGGACCGCGUGUG   GC       G  U^          U    GGG- GUG 
  110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Mature sequence

Hsa-Mir-3619_5p

mirBase accessionMIMAT0017999
Sequence
0- UCAGCAGGCAGGCUGGUGCAGC -22
Get sequence
Proposed targets TargetScanVert: hsa-miR-3619-5p
TargetMiner: hsa-miR-3619-5p
miRDB: MIMAT0017999
Co-mature sequence

Hsa-Mir-3619_3p

mirBase accessionMIMAT0019219
Sequence
31- GGGACCAUCCUGCCUGCUGUGGG -54
Get sequence
Proposed targets TargetScanVert: hsa-miR-3619-3p
TargetMiner: hsa-miR-3619-3p
miRDB: MIMAT0019219