MirGeneDB ID | Hsa-Novel-1-v1 |
Family name |
CAT-NOVEL-1 (all species) |
Seed |
UAGAUGA |
Species |
Human (Homo sapiens) |
MiRBase ID |
|
Paralogues |
Hsa-Novel-1-v2
|
Orthologues |
Mml-Novel-1
|
Node of Origin (locus) |
Catarrhini
|
Node of Origin (family) |
Catarrhini
|
Genome context (hg38) |
chr1: 156103047-156103105 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CAGAGCAGCUGCAGGGACAAAGUCCCCAGCUCAGCUGCAGCCCCCAUGGGUCCACCUUGAGGCAAGGAUAGAUGAGGGCUUGGCUGUGAAAUGAAACCAGGGGAGAGACGGAAGCUGCA
Get precursor sequence
|
Structure | 10 20 30 40 50
CAGAGCAGCUGCAGGGACAAAGUCCC GCU--| C C GG ACCUU
CA CAGCUG AGCCC CAU GUCC G
GU GUCGGU UCGGG GUA UAGG A
ACGUCGAAGGCAGAGAGGGGACCAAA AAAGU^ - A GA AACGG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
2- |
2- |
2- |
2- |
2- |
2- |
2- |
2- |
2- |
2- |
2- |
3- |
3- |
3- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
5- |
5- |
5- |
5- |
5- |
5- |
5- |
6- |
6- |
6- |
6- |
6- |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Star sequence |
Hsa-Novel-1-v1_5p* |
mirBase accession | None |
Sequence |
0- UCAGCUGCAGCCCCCAUGGGUCC -23
Get sequence
|
Mature sequence |
Hsa-Novel-1-v1_3p |
mirBase accession | None |
Sequence |
37- AUAGAUGAGGGCUUGGCUGUGA -59
Get sequence
|